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    Zcchc7 Zinc finger CCHC-type containing 7 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39883, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zcchc7provided by FlyBase
    Official Full Name
    Zinc finger CCHC-type containing 7provided by FlyBase
    Primary source
    FLYBASE:FBgn0036668
    Locus tag
    Dmel_CG9715
    See related
    AllianceGenome:FB:FBgn0036668
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9715; Dmel\CG9715; dZcchc7
    Summary
    Predicted to enable RNA binding activity. Involved in defense response to virus. Predicted to be part of TRAMP complex. Orthologous to human ZCCHC7 (zinc finger CCHC-type containing 7). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Zcchc7 in Genome Data Viewer
    Location:
    73D1-73D1; 3-45 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16845386..16852350)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16838486..16845450)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene nudC Neighboring gene uncharacterized protein Neighboring gene Tumor susceptibility gene 101 Neighboring gene uncharacterized protein Neighboring gene kuduk Neighboring gene Rhodopsin 4 Neighboring gene seven in absentia Neighboring gene sina homologue

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in TRAMP-dependent tRNA surveillance pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in defense response to virus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nuclear mRNA surveillance of mRNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nuclear polyadenylation-dependent CUT catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nuclear polyadenylation-dependent rRNA catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nuclear polyadenylation-dependent snRNA catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nuclear polyadenylation-dependent snoRNA catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of TRAMP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    zinc finger CCHC-type containing 7
    Names
    CG9715-PA
    Zcchc7-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16845386..16852350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140669.4NP_648926.3  zinc finger CCHC-type containing 7 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648926.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VVA9
      Related
      FBpp0075089
      Conserved Domains (1) summary
      PTZ00368
      Location:827937
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional