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    ndvB glycosyl transferase [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877810, updated on 24-Aug-2024

    Summary

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    Gene symbol
    ndvB
    Gene description
    glycosyl transferase
    Locus tag
    PA1163
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1260557..1263166, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene rRNA methyltransferase Neighboring gene succinyl-diaminopimelate desuccinylase Neighboring gene hypothetical protein Neighboring gene 4'-phosphopantetheinyl transferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudomonas aeruginosa Biofilm Antibiotic Resistance Gene ndvB Expression Requires the RpoS Stationary-Phase Sigma Factor. Hall CW, et al. Appl Environ Microbiol, 2018 Apr 1. PMID 29352081, Free PMC Article
    2. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosyl transferase
    NP_249854.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1260557..1263166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249854.1 glycosyl transferase [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249854.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I4H4
      Conserved Domains (3) summary
      PLN02189
      Location:595 → 766
      PLN02189; cellulose synthase
      COG5309
      Location:1 → 296
      Scw11; Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]
      cl11394
      Location:424 → 657
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version

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