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    Mab21l1 mab-21-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 17116, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mab21l1provided by MGI
    Official Full Name
    mab-21-like 1provided by MGI
    Primary source
    MGI:MGI:1333773
    See related
    Ensembl:ENSMUSG00000056947 AllianceGenome:MGI:1333773
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable metal ion binding activity; nucleotide binding activity; and nucleotidyltransferase activity. Acts upstream of or within camera-type eye development and positive regulation of cell population proliferation. Located in nucleus. Is expressed in several structures, including branchial arch; central nervous system; limb bud; maxillary process; and sensory organ. Orthologous to human MAB21L1 (mab-21 like 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mab21l1 in Genome Data Viewer
    Location:
    3 C; 3 26.65 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (55689931..55692708)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (55782510..55785287)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07700 Neighboring gene predicted gene 43549 Neighboring gene neurobeachin Neighboring gene STARR-seq mESC enhancer starr_07702 Neighboring gene predicted gene, 46804 Neighboring gene STARR-seq mESC enhancer starr_07703 Neighboring gene STARR-seq mESC enhancer starr_07704 Neighboring gene SEC13 homolog pseudogene Neighboring gene microRNA 12194 Neighboring gene predicted gene, 31914

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within camera-type eye development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of cell population proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in eye development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in eye development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within positive regulation of cell population proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    putative nucleotidyltransferase MAB21L1
    Names
    protein mab-21-like 1
    NP_034880.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010750.3NP_034880.1  putative nucleotidyltransferase MAB21L1

      See identical proteins and their annotated locations for NP_034880.1

      Status: VALIDATED

      Source sequence(s)
      AC112273, AK032114, BB650529, BC014750, BE950797
      Consensus CDS
      CCDS17360.1
      UniProtKB/Swiss-Prot
      O70299
      Related
      ENSMUSP00000074878.5, ENSMUST00000075422.6
      Conserved Domains (1) summary
      pfam03281
      Location:62344
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      55689931..55692708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)