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    CG16965 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34607, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG16965provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032387
    Locus tag
    Dmel_CG16965
    See related
    AllianceGenome:FB:FBgn0032387
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG16965
    Summary
    Predicted to enable protein-glucosylgalactosylhydroxylysine glucosidase activity. Predicted to be involved in carbohydrate metabolic process. Is expressed in adult heart. Orthologous to human PGGHG (protein-glucosylgalactosylhydroxylysine glucosidase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG16965 in Genome Data Viewer
    Location:
    33B5-33B5; 2-45 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11981591..11984380)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11981591..11984380)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA::CR43314 Neighboring gene uncharacterized protein Neighboring gene bereft Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene zucchini Neighboring gene dim gamma-tubulin 2 Neighboring gene escl

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Salty dog, an SLC5 symporter, modulates Drosophila response to salt stress. Stergiopoulos K, et al. Physiol Genomics, 2009 Mar 3. PMID 19018044, Free PMC Article
    2. Identification of conserved transcriptome features between humans and Drosophila in the aging brain utilizing machine learning on combined data from the NIH Sequence Read Archive. Webb JL, et al. PLoS One, 2021. PMID 34379632, Free PMC Article
    3. Drosophila microbiota modulates host metabolic gene expression via IMD/NF-κB signaling. Erkosar B, et al. PLoS One, 2014. PMID 24733183, Free PMC Article
    4. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
    5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein-glucosylgalactosylhydroxylysine glucosidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16965-PC
    NP_609528.3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      11981591..11984380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135684.5 → NP_609528.3  uncharacterized protein Dmel_CG16965 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609528.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3DMW0, Q9VKD9
      Conserved Domains (2) summary
      COG1554
      Location:41 → 657
      ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
      pfam03632
      Location:308 → 657
      Glyco_hydro_65m; Glycosyl hydrolase family 65 central catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VKD9 Q9VKD9

    Gene LinkOut

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