U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Hsepi Heparan sulfate C5-epimerase [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35569, updated on 9-Dec-2024

    Summary

    Official Symbol
    Hsepiprovided by FlyBase
    Official Full Name
    Heparan sulfate C5-epimeraseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033087
    Locus tag
    Dmel_CG3194
    See related
    AllianceGenome:FB:FBgn0033087
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3194; Dmel\CG3194
    Summary
    Predicted to enable heparosan-N-sulfate-glucuronate 5-epimerase activity. Involved in heparan sulfate proteoglycan biosynthetic process. Predicted to be active in Golgi apparatus. Is expressed in adult head; epithelial furrow; imaginal disc; and nurse cell. Human ortholog(s) of this gene implicated in cerebrovascular disease and hypertension. Orthologous to human GLCE (glucuronic acid epimerase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hsepi in Genome Data Viewer
    Location:
    42C4-42C4; 2-55 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (6670154..6673372, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (2557659..2560877, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Post-GPI attachment to proteins 3 Neighboring gene uncharacterized protein Neighboring gene Ribonuclease P/MRP subunit p25 Neighboring gene Tyrosine decarboxylase 1

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    heparan sulfate C5-epimerase
    Names
    C5-epimerase
    CG3194-PA
    CG3194-PB
    Hsepi-PA
    Hsepi-PB
    heparan sulfate glucuronyl C5-epimerase
    NP_001163062.1
    NP_610249.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      6670154..6673372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169591.2NP_001163062.1  heparan sulfate C5-epimerase, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163062.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C3KGM6
      Conserved Domains (1) summary
      pfam06662
      Location:413602
      C5-epim_C; D-glucuronyl C5-epimerase C-terminus
    2. NM_136405.4NP_610249.2  heparan sulfate C5-epimerase, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610249.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z6M8
      Related
      FBpp0085478
      Conserved Domains (1) summary
      pfam06662
      Location:415604
      C5-epim_C; D-glucuronyl C5-epimerase C-terminus