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    POLDIP3 DNA polymerase delta interacting protein 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 512693, updated on 1-Jan-2025

    Summary

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    Official Symbol
    POLDIP3provided by VGNC
    Official Full Name
    DNA polymerase delta interacting protein 3provided by VGNC
    Primary source
    VGNC:VGNC:33117
    See related
    BGD:BT17220; Ensembl:ENSBTAG00000016511
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See POLDIP3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (113447522..113470658, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132345363 Neighboring gene serine hydrolase like 2 Neighboring gene ribosomal RNA processing 7 homolog Neighboring gene U12 minor spliceosomal RNA Neighboring gene cytochrome b5 reductase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polymerase delta-interacting protein 3
    Names
    polymerase (DNA-directed), delta interacting protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103183.1 → NP_001096653.1  polymerase delta-interacting protein 3

      See identical proteins and their annotated locations for NP_001096653.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      A7YW33, F1N375
      Related
      ENSBTAP00000021952.4, ENSBTAT00000021952.5
      Conserved Domains (2) summary
      COG0724
      Location:216 → 407
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12681
      Location:280 → 348
      RRM_SKAR; RNA recognition motif in S6K1 Aly/REF-like target (SKAR) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      113447522..113470658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010805748.4 → XP_010804050.1  polymerase delta-interacting protein 3 isoform X2

      UniProtKB/TrEMBL
      A0AAA9SBL8
      Related
      ENSBTAP00000080870.1, ENSBTAT00000129543.1
      Conserved Domains (2) summary
      COG0724
      Location:155 → 346
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12681
      Location:219 → 287
      RRM_SKAR; RNA recognition motif in S6K1 Aly/REF-like target (SKAR) and similar proteins

    2. XM_005207388.5 → XP_005207445.1  polymerase delta-interacting protein 3 isoform X1

      See identical proteins and their annotated locations for XP_005207445.1

      UniProtKB/TrEMBL
      A0A3Q1MEC5
      Related
      ENSBTAP00000067225.1, ENSBTAT00000082837.2
      Conserved Domains (2) summary
      COG0724
      Location:187 → 378
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12681
      Location:251 → 319
      RRM_SKAR; RNA recognition motif in S6K1 Aly/REF-like target (SKAR) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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