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    PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha [ Bos taurus (domestic cattle) ]

    Gene ID: 100125224, updated on 1-Jan-2025

    Summary

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    Official Symbol
    PIP5K1Aprovided by VGNC
    Official Full Name
    phosphatidylinositol-4-phosphate 5-kinase type 1 alphaprovided by VGNC
    Primary source
    VGNC:VGNC:55656
    See related
    BGD:BT24184; Ensembl:ENSBTAG00000006099
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PIP5K1A in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (19572071..19611272, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene ferritin light chain-like Neighboring gene proteasome 26S subunit ubiquitin receptor, non-ATPase 4 Neighboring gene vacuolar protein sorting 72 homolog Neighboring gene tropomodulin 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC159892

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 4-phosphate 5-kinase type-1 alpha
    Names
    phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
    NP_001096579.1
    XP_005203881.1
    XP_005203882.1
    XP_005203884.1
    XP_010801293.1
    XP_010801294.1
    XP_010801295.1
    XP_024839932.1
    XP_059737110.1
    XP_059737111.1
    XP_059737112.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103109.2 → NP_001096579.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha

      See identical proteins and their annotated locations for NP_001096579.1

      Status: VALIDATED

      Source sequence(s)
      BC147915, BC149482
      UniProtKB/TrEMBL
      A0AAA9SDK3, A6QLC5
      Related
      ENSBTAP00000008015.5, ENSBTAT00000008015.6
      Conserved Domains (1) summary
      smart00330
      Location:95 → 435
      PIPKc; Phosphatidylinositol phosphate kinases

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      19572071..19611272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005203825.5 → XP_005203882.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X2

      See identical proteins and their annotated locations for XP_005203882.1

      UniProtKB/TrEMBL
      A0AAA9SDK3, A6QLC5
      Related
      ENSBTAP00000076719.1, ENSBTAT00000124651.1
      Conserved Domains (1) summary
      smart00330
      Location:95 → 435
      PIPKc; Phosphatidylinositol phosphate kinases

    2. XM_005203824.5 → XP_005203881.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1

      See identical proteins and their annotated locations for XP_005203881.1

      UniProtKB/TrEMBL
      A0AAA9SDK3, A0AAA9SI39
      Related
      ENSBTAP00000083558.1, ENSBTAT00000091943.1
      Conserved Domains (1) summary
      smart00330
      Location:108 → 448
      PIPKc; Phosphatidylinositol phosphate kinases

    3. XM_024984164.2 → XP_024839932.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X7

      UniProtKB/TrEMBL
      A0AAA9SDK3
      Conserved Domains (1) summary
      smart00330
      Location:95 → 435
      PIPKc; Phosphatidylinositol phosphate kinases

    4. XM_005203827.4 → XP_005203884.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X6

      UniProtKB/TrEMBL
      A0AAA9SDK3
      Conserved Domains (1) summary
      smart00330
      Location:108 → 448
      PIPKc; Phosphatidylinositol phosphate kinases

    5. XM_010802993.4 → XP_010801295.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5

      See identical proteins and their annotated locations for XP_010801295.1

      UniProtKB/TrEMBL
      A0AAA9RWD6
      Conserved Domains (1) summary
      smart00330
      Location:51 → 391
      PIPKc; Phosphatidylinositol phosphate kinases

    6. XM_059881129.1 → XP_059737112.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5

      UniProtKB/TrEMBL
      A0AAA9RWD6

    7. XM_010802992.4 → XP_010801294.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5

      See identical proteins and their annotated locations for XP_010801294.1

      UniProtKB/TrEMBL
      A0AAA9RWD6
      Conserved Domains (1) summary
      smart00330
      Location:51 → 391
      PIPKc; Phosphatidylinositol phosphate kinases

    8. XM_059881128.1 → XP_059737111.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X5

      UniProtKB/TrEMBL
      A0AAA9RWD6

    9. XM_059881127.1 → XP_059737110.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X3

      UniProtKB/TrEMBL
      A0AAA9RWD6

    10. XM_010802991.4 → XP_010801293.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X4

      See identical proteins and their annotated locations for XP_010801293.1

      UniProtKB/TrEMBL
      A0AAA9RWD6, A8E4M7
      Related
      ENSBTAP00000036545.4, ENSBTAT00000036689.5
      Conserved Domains (1) summary
      smart00330
      Location:73 → 413
      PIPKc; Phosphatidylinositol phosphate kinases
    Nucleotide Protein Strain
    Heading Accession and Version

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