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    PAQR6 progestin and adipoQ receptor family member 6 [ Bos taurus (domestic cattle) ]

    Gene ID: 516498, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PAQR6provided by VGNC
    Official Full Name
    progestin and adipoQ receptor family member 6provided by VGNC
    Primary source
    VGNC:VGNC:32578
    See related
    BGD:BT25240; EnsemblRapid:ENSBTAG00070010644
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PAQR6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (14546206..14551090)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 79 Neighboring gene SMG5 nonsense mediated mRNA decay factor Neighboring gene bone gamma-carboxyglutamate protein Neighboring gene polyamine modulated factor 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A second generation radiation hybrid map to aid the assembly of the bovine genome sequence. Jann OC, et al. BMC Genomics, 2006 Nov 6. PMID 17087818, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137682

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    membrane progestin receptor delta
    Names
    progestin and adipoQ receptor family member VI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046225.2 → NP_001039690.2  membrane progestin receptor delta

      Status: VALIDATED

      Source sequence(s)
      CO885827, DV874964, DV879653, DV884229, EE359306
      UniProtKB/TrEMBL
      A0A3Q1LL02, F1MET1
      Related
      ENSBTAP00070014184.1, ENSBTAT00070023893.1
      Conserved Domains (1) summary
      pfam03006
      Location:43 → 272
      HlyIII; Haemolysin-III related

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      14546206..14551090
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005203708.5 → XP_005203765.2  membrane progestin receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LL02
      Conserved Domains (1) summary
      pfam03006
      Location:59 → 288
      HlyIII; Haemolysin-III related

    2. XM_005203709.5 → XP_005203766.2  membrane progestin receptor delta isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LL02, F1MET1
      Conserved Domains (1) summary
      pfam03006
      Location:43 → 272
      HlyIII; Haemolysin-III related

    3. XM_005203707.5 → XP_005203764.2  membrane progestin receptor delta isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LL02
      Conserved Domains (1) summary
      pfam03006
      Location:59 → 288
      HlyIII; Haemolysin-III related

    4. XM_010802906.4 → XP_010801208.3  membrane progestin receptor delta isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LL02
    Nucleotide Protein Strain
    Heading Accession and Version

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