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    SHFL shiftless antiviral inhibitor of ribosomal frameshifting [ Bos taurus (domestic cattle) ]

    Gene ID: 539087, updated on 30-Jan-2025

    Summary

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    Official Symbol
    SHFLprovided by VGNC
    Official Full Name
    shiftless antiviral inhibitor of ribosomal frameshiftingprovided by VGNC
    Primary source
    VGNC:VGNC:55202
    See related
    EnsemblRapid:ENSBTAG00070013192
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RyDEN; C7H19orf66
    Orthologs
    human mouse all
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    Genomic context

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    See SHFL in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (14650071..14654413)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 8 Neighboring gene complement C3 Neighboring gene angiopoietin like 6 Neighboring gene small nucleolar RNA SNORD105 Neighboring gene small nucleolar RNA U105B Neighboring gene peter pan homolog (Drosophila)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC134419

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in viral translational frameshifting IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    shiftless antiviral inhibitor of ribosomal frameshifting protein homolog
    Names
    UPF0515 protein C19orf66 homolog
    chromosome 7 C19orf66 homolog
    repressor of yield of DENV protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038181.1 → NP_001033270.1  shiftless antiviral inhibitor of ribosomal frameshifting protein homolog

      See identical proteins and their annotated locations for NP_001033270.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109821
      UniProtKB/Swiss-Prot
      Q32L09
      UniProtKB/TrEMBL
      G3X770
      Related
      ENSBTAP00070018123.1, ENSBTAT00070029919.1
      Conserved Domains (1) summary
      pfam15135
      Location:16 → 272
      UPF0515; Uncharacterized protein UPF0515

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      14650071..14654413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32L09.1 GenPept UniProtKB/Swiss-Prot:Q32L09

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