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    MGME1 mitochondrial genome maintenance exonuclease 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506205, updated on 27-Dec-2024

    Summary

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    Official Symbol
    MGME1provided by VGNC
    Official Full Name
    mitochondrial genome maintenance exonuclease 1provided by VGNC
    Primary source
    VGNC:VGNC:31450
    See related
    Ensembl:ENSBTAG00000003425
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C13H20orf72
    Orthologs
    human mouse all
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    Genomic context

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    See MGME1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (38240396..38250803)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 5 Neighboring gene small nucleolar RNA SNORD17 Neighboring gene microRNA mir-12034 Neighboring gene ovo like zinc finger 2 Neighboring gene PET117 cytochrome c oxidase chaperone Neighboring gene lysine acetyltransferase 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC138976

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables single-stranded DNA exodeoxyribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial genome maintenance exonuclease 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075245.1 → NP_001068713.1  mitochondrial genome maintenance exonuclease 1

      Status: PROVISIONAL

      Source sequence(s)
      BC116086
      UniProtKB/TrEMBL
      F6Q192, Q1LZC4
      Related
      ENSBTAP00000004442.5, ENSBTAT00000004442.5
      Conserved Domains (1) summary
      cl00641
      Location:177 → 328
      Cas4_I-A_I-B_I-C_I-D_II-B; CRISPR/Cas system-associated protein Cas4

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      38240396..38250803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892475.1 → XP_059748458.1  mitochondrial genome maintenance exonuclease 1 isoform X1

      UniProtKB/TrEMBL
      F6Q192, Q1LZC4

    2. XM_005214328.5 → XP_005214385.2  mitochondrial genome maintenance exonuclease 1 isoform X1

      UniProtKB/TrEMBL
      F6Q192, Q1LZC4
      Conserved Domains (1) summary
      cl00641
      Location:177 → 328
      Cas4_I-A_I-B_I-C_I-D_II-B; CRISPR/Cas system-associated protein Cas4
    Nucleotide Protein Strain
    Heading Accession and Version

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