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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001114131.1 → NP_001107603.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment in the 5' coding region, compared to variant 1. The resulting isoform (b) lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AC139751, AK133969, AK166418, AV275830, BC026489, BI135060, CX568699
- Consensus CDS
-
CCDS50167.1
- UniProtKB/TrEMBL
- E9PX53, Q3TLM9
- Related
- ENSMUSP00000124690.2, ENSMUST00000160664.8
- Conserved Domains (2) summary
-
- pfam15017
Location:419 → 475
- AF1Q; Drug resistance and apoptosis regulator
- sd00044
Location:116 → 140
- HEAT; HEAT repeat [structural motif]
-
NM_146081.2 → NP_666193.2 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC139751, AK133969, AK166418, AV275830, BC026489, BI135060, BY163631, CX568699
- Consensus CDS
-
CCDS28941.2
- UniProtKB/Swiss-Prot
- Q8K2V1, Q8R0R8
- UniProtKB/TrEMBL
-
E9QPR5
- Related
- ENSMUSP00000072848.5, ENSMUST00000073104.11
- Conserved Domains (2) summary
-
- pfam15017
Location:436 → 492
- AF1Q; Drug resistance and apoptosis regulator
- sd00044
Location:133 → 157
- HEAT; HEAT repeat [structural motif]
RNA
-
NR_104465.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC139751, AK133969, AK167713, BI135060
- Related
-
ENSMUST00000162109.8
-
NR_152099.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC139751, BI135060, CT025659
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
66089253..66148921
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006524889.5 → XP_006524952.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_006524890.5 → XP_006524953.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_006524888.5 → XP_006524951.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_030250045.2 → XP_030105905.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_030250046.2 → XP_030105906.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_030250047.2 → XP_030105907.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X3
- Conserved Domains (2) summary
-
- sd00044
Location:316 → 344
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:105 → 123
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_006524891.5 → XP_006524954.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_006524892.5 → XP_006524955.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (2) summary
-
- sd00044
Location:90 → 114
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:411 → 427
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_036160783.1 → XP_036016676.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X2
- UniProtKB/TrEMBL
-
Q3TLM9
- Conserved Domains (3) summary
-
- sd00044
Location:16 → 47
- HEAT; HEAT repeat [structural motif]
- pfam02985
Location:57 → 84
- HEAT; HEAT repeat
- pfam15017
Location:258 → 292
- WRNPLPNID; Putative WW-binding domain and destruction box
-
XM_006524895.5 → XP_006524958.1 serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X3
- UniProtKB/Swiss-Prot
-
Q8K2V1
- Conserved Domains (2) summary
-
- sd00044
Location:316 → 344
- HEAT; HEAT repeat [structural motif]
- pfam15017
Location:105 → 123
- WRNPLPNID; Putative WW-binding domain and destruction box
RNA
-
XR_003952177.1 RNA Sequence
-
XR_001782110.2 RNA Sequence