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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001081388.2 → NP_001074857.1 RIMS-binding protein 2 isoform 1
See identical proteins and their annotated locations for NP_001074857.1
Status: VALIDATED
- Source sequence(s)
-
AK038814, AK044685, AK147417, BC151100, BP762839, CF745262, CJ115058
- Consensus CDS
-
CCDS39288.1
- UniProtKB/Swiss-Prot
- B9EKT4, E9QPF5, Q80U40
- UniProtKB/TrEMBL
-
D3YXR8
- Related
- ENSMUSP00000106978.2, ENSMUST00000111346.6
- Conserved Domains (6) summary
-
- cd12012
Location:879 → 940
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:983 → 1043
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:414 → 478
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin; Kisspeptin
-
NM_001310733.1 → NP_001297662.1 RIMS-binding protein 2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC111089, AK044685, AK147417, BC151100, BP762839, CF745262, CJ115058
- Consensus CDS
-
CCDS80415.1
- UniProtKB/Swiss-Prot
- B9EKT4, E9QPF5, Q80U40
- UniProtKB/TrEMBL
-
A0A0G2JFB0
- Related
- ENSMUSP00000143099.2, ENSMUST00000200470.5
- Conserved Domains (8) summary
-
- cd12012
Location:872 → 933
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:976 → 1036
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:185 → 245
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd00063
Location:501 → 587
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:407 → 471
- fn3; Fibronectin type III domain
- pfam15152
Location:637 → 678
- Kisspeptin; Kisspeptin
- cd16269
Location:56 → 70
- GBP_C; coiled coil [structural motif]
- cl20817
Location:1 → 88
- GBP_C; Guanylate-binding protein, C-terminal domain
-
NM_001378900.1 → NP_001365829.1 RIMS-binding protein 2 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC110566, AC111089, AC116715
- UniProtKB/Swiss-Prot
- B9EKT4, E9QPF5, Q80U40
- Conserved Domains (8) summary
-
- cd12012
Location:872 → 933
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:976 → 1036
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:185 → 245
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- smart00060
Location:314 → 391
- FN3; Fibronectin type 3 domain
- PHA03321
Location:586 → 730
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:501 → 587
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:407 → 474
- fn3; Fibronectin type III domain
- pfam15905
Location:4 → 88
- HMMR_N; Hyaluronan mediated motility receptor N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
128834852..129030636 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017320870.3 → XP_017176359.1 RIMS-binding protein 2 isoform X5
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (8) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin
-
XM_006504296.4 → XP_006504359.1 RIMS-binding protein 2 isoform X4
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (8) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin
-
XM_006504297.5 → XP_006504360.1 RIMS-binding protein 2 isoform X6
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (9) summary
-
- cd12012
Location:1109 → 1170
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1213 → 1273
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:185 → 245
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- smart00060
Location:314 → 391
- FN3; Fibronectin type 3 domain
- PHA03321
Location:586 → 730
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:501 → 587
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:407 → 474
- fn3; Fibronectin type III domain
- pfam15152
Location:637 → 678
- Kisspeptin
- pfam15905
Location:8 → 88
- HMMR_N; Hyaluronan mediated motility receptor N-terminal
-
XM_006504288.5 → XP_006504351.1 RIMS-binding protein 2 isoform X1
See identical proteins and their annotated locations for XP_006504351.1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (7) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
-
XM_006504295.5 → XP_006504358.1 RIMS-binding protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (7) summary
-
- cd12012
Location:1067 → 1128
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1171 → 1231
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin
-
XM_006504289.5 → XP_006504352.1 RIMS-binding protein 2 isoform X1
See identical proteins and their annotated locations for XP_006504352.1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (7) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
-
XM_006504293.4 → XP_006504356.1 RIMS-binding protein 2 isoform X2
See identical proteins and their annotated locations for XP_006504356.1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (9) summary
-
- cd12012
Location:1109 → 1170
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1213 → 1273
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:185 → 245
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- smart00060
Location:314 → 391
- FN3; Fibronectin type 3 domain
- PHA03321
Location:586 → 730
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:501 → 587
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:407 → 474
- fn3; Fibronectin type III domain
- pfam15152
Location:637 → 678
- Kisspeptin
- pfam15905
Location:8 → 88
- HMMR_N; Hyaluronan mediated motility receptor N-terminal
-
XM_030254432.1 → XP_030110292.1 RIMS-binding protein 2 isoform X8
- UniProtKB/TrEMBL
-
A0A0G2JGW5
- Related
- ENSMUSP00000143725.2, ENSMUST00000196085.5
- Conserved Domains (8) summary
-
- cd12012
Location:830 → 891
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:934 → 994
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 709
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin
-
XM_017320871.2 → XP_017176360.1 RIMS-binding protein 2 isoform X7
- UniProtKB/Swiss-Prot
- B9EKT4, E9QPF5, Q80U40
- Conserved Domains (9) summary
-
- cd12012
Location:879 → 940
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:983 → 1043
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- smart00060
Location:321 → 398
- FN3; Fibronectin type 3 domain
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
- pfam15152
Location:644 → 685
- Kisspeptin
-
XM_036165094.1 → XP_036020987.1 RIMS-binding protein 2 isoform X1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (7) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
-
XM_006504294.5 → XP_006504357.1 RIMS-binding protein 2 isoform X2
See identical proteins and their annotated locations for XP_006504357.1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Related
- ENSMUSP00000158659.2, ENSMUST00000238334.2
- Conserved Domains (9) summary
-
- cd12012
Location:1109 → 1170
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1213 → 1273
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:185 → 245
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- smart00060
Location:314 → 391
- FN3; Fibronectin type 3 domain
- PHA03321
Location:586 → 730
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:501 → 587
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:407 → 474
- fn3; Fibronectin type III domain
- pfam15152
Location:637 → 678
- Kisspeptin
- pfam15905
Location:8 → 88
- HMMR_N; Hyaluronan mediated motility receptor N-terminal
-
XM_011240839.4 → XP_011239141.1 RIMS-binding protein 2 isoform X1
See identical proteins and their annotated locations for XP_011239141.1
- UniProtKB/TrEMBL
-
A0A571BDA2
- Conserved Domains (7) summary
-
- cd12012
Location:1116 → 1177
- SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12013
Location:1220 → 1280
- SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- cd12014
Location:192 → 252
- SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
- PHA03321
Location:593 → 737
- PHA03321; tegument protein VP11/12; Provisional
- cd00063
Location:508 → 594
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- TIGR02168
Location:2 → 87
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00041
Location:414 → 481
- fn3; Fibronectin type III domain
RNA
-
XR_377055.5 RNA Sequence