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    Gm16701 predicted gene, 16701 [ Mus musculus (house mouse) ]

    Gene ID: 100503962, updated on 26-Oct-2024

    Summary

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    Official Symbol
    Gm16701provided by MGI
    Official Full Name
    predicted gene, 16701provided by MGI
    Primary source
    MGI:MGI:4439625
    See related
    AllianceGenome:MGI:4439625
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ln-CR2
    Expression
    Biased expression in CNS E18 (RPKM 2.9), whole brain E14.5 (RPKM 2.3) and 8 other tissues See more
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    Genomic context

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    See Gm16701 in Genome Data Viewer
    Location:
    1 H2.3; 1 74.35 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (166801592..166827299, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (166974023..166999730, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33404 Neighboring gene STARR-seq mESC enhancer starr_02934 Neighboring gene STARR-seq mESC enhancer starr_02935 Neighboring gene STARR-seq mESC enhancer starr_02936 Neighboring gene STARR-seq mESC enhancer starr_02937 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene family with sequence similarity 78, member B Neighboring gene STARR-seq mESC enhancer starr_02940 Neighboring gene predicted gene, 33610 Neighboring gene predicted gene, 33668

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons. Li J, et al. PLoS Genet, 2021 Mar. PMID 33760820, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037988.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC119212

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      166801592..166827299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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