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    Lipo4 lipase, member O4 [ Mus musculus (house mouse) ]

    Gene ID: 628236, updated on 4-Jan-2025

    Summary

    Official Symbol
    Lipo4provided by MGI
    Official Full Name
    lipase, member O4provided by MGI
    Primary source
    MGI:MGI:3779637
    See related
    Ensembl:ENSMUSG00000079344 AllianceGenome:MGI:3779637
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm6857
    Summary
    Predicted to enable sterol ester esterase activity. Predicted to be involved in sterol metabolic process. Predicted to be active in intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Lipo4 in Genome Data Viewer
    Location:
    19 C1; 19 29.17 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (33476449..33495170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (33499049..33517770, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45974 Neighboring gene 39S ribosomal protein L33, mitochondrial pseudogene Neighboring gene lipase, member O5 Neighboring gene 39S ribosomal protein L33, mitochondrial pseudogene Neighboring gene lipase, member O3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables sterol ester esterase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in sterol metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323386.1NP_001310315.1  lipase, member O4 precursor

      Status: INFERRED

      Source sequence(s)
      AC141640
      Consensus CDS
      CCDS89378.1
      UniProtKB/TrEMBL
      F6RR30, Q3TD80
      Related
      ENSMUSP00000121321.3, ENSMUST00000143522.9
      Conserved Domains (2) summary
      pfam00561
      Location:77375
      Abhydrolase_1; alpha/beta hydrolase fold
      pfam04083
      Location:3395
      Abhydro_lipase; Partial alpha/beta-hydrolase lipase region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      33476449..33495170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)