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    LINC02186 long intergenic non-protein coding RNA 2186 [ Homo sapiens (human) ]

    Gene ID: 101927348, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02186provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2186provided by HGNC
    Primary source
    HGNC:HGNC:53048
    See related
    Ensembl:ENSG00000261856 AllianceGenome:HGNC:53048
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02186 in Genome Data Viewer
    Location:
    16p13.12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (14018880..14021077, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (14056174..14058371, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (14112737..14114934, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371093 Neighboring gene ribosomal protein S26 pseudogene 52 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7223 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr16:14050534-14051733 Neighboring gene ERCC excision repair 4, endonuclease catalytic subunit Neighboring gene long intergenic non-protein coding RNA 2185 Neighboring gene myocardin related transcription factor B Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:14144523-14145135 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7226 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7227 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10489 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10490 Neighboring gene uncharacterized LOC124903783 Neighboring gene TVP23C pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110915.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC039386
      Related
      ENST00000575767.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      14018880..14021077 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      14056174..14058371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)