U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LINC02450 long intergenic non-protein coding RNA 2450 [ Homo sapiens (human) ]

    Gene ID: 105369739, updated on 26-Oct-2024

    Summary

    Official Symbol
    LINC02450provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2450provided by HGNC
    Primary source
    HGNC:HGNC:53382
    See related
    Ensembl:ENSG00000257114 AllianceGenome:HGNC:53382
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC02451
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LINC02450 in Genome Data Viewer
    Location:
    12q12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (42692216..42717119)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (42650068..42674969)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (43086018..43110921)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2402 Neighboring gene CDGSH iron sulfur domain 1 pseudogene Neighboring gene long intergenic non-protein coding RNA 2451 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4368 Neighboring gene ribosomal protein S27 pseudogene 21 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:43150282-43151168 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4369 Neighboring gene 5'-aminolevulinate synthase 1 pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:43354422-43355621 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:43379228-43379820 Neighboring gene mitochondrial ribosomal protein S36 pseudogene 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135028.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC089982, BF109454, BX096171
      Related
      ENST00000550177.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      42692216..42717119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      42650068..42674969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)