U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y56A3A.30 SP-RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176634, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y56A3A.30
    Official Full Name
    SP-RING-type domain-containing protein
    Primary source
    WormBase:WBGene00013242
    Locus tag
    CELE_Y56A3A.30
    See related
    AllianceGenome:WB:WBGene00013242
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y56A3A.30 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (11974128..11979065, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene Uracil-DNA glycosylase Neighboring gene SOSS complex subunit A homolog Neighboring gene Pyr_redox_2 domain-containing protein Neighboring gene Exonuclease domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    General protein information

    Go to the top of the page Help
    Preferred Names
    SP-RING-type domain-containing protein
    NP_499562.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11974128..11979065 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067161.6 → NP_499562.1  SP-RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499562.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U234
      Conserved Domains (1) summary
      PRK08581
      Location:287 → 463
      PRK08581; N-acetylmuramoyl-L-alanine amidase; Validated
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools