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    DENND4A DENN domain containing 4A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709675, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DENND4Aprovided by VGNC
    Official Full Name
    DENN domain containing 4Aprovided by VGNC
    Primary source
    VGNC:VGNC:71697
    See related
    Ensembl:ENSMMUG00000022056
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DENND4A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (42211492..42343981, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (42352805..42485568, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 14 Neighboring gene solute carrier family 24 member 1 Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-myc promoter-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      42211492..42343981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142510.2 → XP_014997996.2  C-myc promoter-binding protein isoform X5

      UniProtKB/TrEMBL
      A0A5F8A676, A0A5F8ACW1
      Related
      ENSMMUP00000072413.1, ENSMMUT00000082729.1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    2. XM_015142507.2 → XP_014997993.2  C-myc promoter-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A5F8ACW1, A0A5F8ATF6
      Related
      ENSMMUP00000080639.1, ENSMMUT00000089524.1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    3. XM_015142503.2 → XP_014997989.2  C-myc promoter-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACW1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    4. XM_015142506.2 → XP_014997992.2  C-myc promoter-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACW1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    5. XM_015142505.2 → XP_014997991.2  C-myc promoter-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACW1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    6. XM_015142504.2 → XP_014997990.2  C-myc promoter-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACW1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    7. XM_015142509.2 → XP_014997995.2  C-myc promoter-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZTJ5, A0A5F8ACW1
      Related
      ENSMMUP00000067967.1, ENSMMUT00000093901.1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    8. XM_015142508.2 → XP_014997994.2  C-myc promoter-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A5F8ACW1, A0A5S6R8X3, A0A8J8XX70, F7F9T9, G7MXV2
      Related
      ENSMMUP00000030820.4, ENSMMUT00000032938.4
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family

    9. XM_015142511.2 → XP_014997997.2  C-myc promoter-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A5F8ACW1, H9ERK4
      Related
      ENSMMUP00000075710.1, ENSMMUT00000094803.1
      Conserved Domains (5) summary
      smart00801
      Location:559 → 632
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:194 → 276
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      sd00004
      Location:810 → 839
      PPR; PPR repeat [structural motif]
      pfam02141
      Location:308 → 492
      DENN; DENN (AEX-3) domain
      pfam13041
      Location:808 → 848
      PPR_2; PPR repeat family
    Nucleotide Protein
    Heading Accession and Version

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