U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CROT carnitine O-octanoyltransferase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706186, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CROTprovided by VGNC
    Official Full Name
    carnitine O-octanoyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:71495
    See related
    Ensembl:ENSMMUG00000010787
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CROT in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (118723579..118781422, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (106714838..106773457, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676994 Neighboring gene ATP binding cassette subfamily B member 1 Neighboring gene uncharacterized LOC106997550 Neighboring gene ATP binding cassette subfamily B member 4 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene transmembrane protein 243 Neighboring gene cyclin D binding myb like transcription factor 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carnitine O-octanoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    peroxisomal carnitine O-octanoyltransferase
    XP_014989650.2
    XP_028701948.1
    XP_028701949.1
    XP_028701950.1
    XP_028701951.1
    XP_028701952.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      118723579..118781422 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846117.1 → XP_028701950.1  peroxisomal carnitine O-octanoyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A1D5RCM0, A0A5S6RDL9, A0A8J8YNM1, G7MLY9, H9F620
      Conserved Domains (1) summary
      pfam00755
      Location:20 → 603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    2. XM_028846116.1 → XP_028701949.1  peroxisomal carnitine O-octanoyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A1D5RCM0, A0A5S6RDL9, A0A8J8YNM1, G7MLY9, H9F620
      Related
      ENSMMUP00000079663.1, ENSMMUT00000099466.1
      Conserved Domains (1) summary
      pfam00755
      Location:20 → 603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    3. XM_028846115.1 → XP_028701948.1  peroxisomal carnitine O-octanoyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A1D5RCM0, A0A5S6RDL9, A0A8J8YNM1, G7MLY9, H9F620
      Related
      ENSMMUP00000058062.2, ENSMMUT00000058161.2
      Conserved Domains (1) summary
      pfam00755
      Location:20 → 603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    4. XM_015134164.2 → XP_014989650.2  peroxisomal carnitine O-octanoyltransferase isoform X3

      UniProtKB/TrEMBL
      H9F620
      Conserved Domains (1) summary
      pfam00755
      Location:1 → 448
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    5. XM_028846118.1 → XP_028701951.1  peroxisomal carnitine O-octanoyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A1D5RCM0, A0A5S6RDL9, A0A8J8YNM1, G7MLY9, H9F620
      Conserved Domains (1) summary
      pfam00755
      Location:20 → 603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    6. XM_028846119.1 → XP_028701952.1  peroxisomal carnitine O-octanoyltransferase isoform X2

      UniProtKB/TrEMBL
      F7GUY4
      Related
      ENSMMUP00000014127.4, ENSMMUT00000015075.4
      Conserved Domains (1) summary
      pfam00755
      Location:20 → 575
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.