U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    IFT46 intraflagellar transport 46 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700582, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IFT46provided by VGNC
    Official Full Name
    intraflagellar transport 46provided by VGNC
    Primary source
    VGNC:VGNC:73444
    Locus tag
    EGK_06960
    See related
    Ensembl:ENSMMUG00000014455
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IFT46 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (111619494..111638931, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (111398147..111421181, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 36 Neighboring gene transmembrane protein 25 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene 60S ribosomal protein L5-like Neighboring gene archain 1 Neighboring gene U6 spliceosomal RNA Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene trehalase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intraciliary transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle B IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    intraflagellar transport protein 46 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      111619494..111638931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015115845.2 → XP_014971331.1  intraflagellar transport protein 46 homolog isoform X2

      UniProtKB/TrEMBL
      F6XV07, H9ESL0
      Related
      ENSMMUP00000080161.1, ENSMMUT00000095653.1
      Conserved Domains (1) summary
      pfam12317
      Location:65 → 267
      IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal

    2. XM_015115844.2 → XP_014971330.1  intraflagellar transport protein 46 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5RDQ1, A0A8J8Y8V2, F7BAW0, G7NCC8
      Related
      ENSMMUP00000058444.1, ENSMMUT00000078864.2
      Conserved Domains (1) summary
      pfam12317
      Location:116 → 318
      IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal

    3. XM_028834042.1 → XP_028689875.1  intraflagellar transport protein 46 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5RDQ1, A0A8J8Y8V2, F7BAW0, G7NCC8
      Conserved Domains (1) summary
      pfam12317
      Location:116 → 318
      IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal

    4. XM_028834044.1 → XP_028689877.1  intraflagellar transport protein 46 homolog isoform X3

      UniProtKB/TrEMBL
      A0A5K1V351
      Related
      ENSMMUP00000036666.3, ENSMMUT00000043673.3
      Conserved Domains (1) summary
      pfam12317
      Location:53 → 255
      IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.