U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CSRNP1 cysteine and serine rich nuclear protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694328, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CSRNP1provided by VGNC
    Official Full Name
    cysteine and serine rich nuclear protein 1provided by VGNC
    Primary source
    VGNC:VGNC:71404
    Locus tag
    EGK_11782
    See related
    Ensembl:ENSMMUG00000020147
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    AXUD1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CSRNP1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (94606455..94618170, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (103519205..103530920)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 48 Neighboring gene golgi reassembly stacking protein 1 Neighboring gene tetratricopeptide repeat domain 21A Neighboring gene uncharacterized LOC114676320 Neighboring gene uncharacterized LOC106996955 Neighboring gene xin actin binding repeat containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cysteine/serine-rich nuclear protein 1
    Names
    AXIN1 up-regulated 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258149.2 → NP_001245078.1  cysteine/serine-rich nuclear protein 1

      See identical proteins and their annotated locations for NP_001245078.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476814
      UniProtKB/TrEMBL
      A0A8J8YB40, G7MJ03, H9ZCF2
      Related
      ENSMMUP00000068166.1, ENSMMUT00000110168.1
      Conserved Domains (1) summary
      pfam16019
      Location:85 → 306
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      94606455..94618170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131311.2 → XP_014986797.1  cysteine/serine-rich nuclear protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8J8YB40, G7MJ03, H9ZCF2
      Conserved Domains (1) summary
      pfam16019
      Location:85 → 306
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. XM_015131309.2 → XP_014986795.1  cysteine/serine-rich nuclear protein 1 isoform X2

      UniProtKB/TrEMBL
      F6TYP2, F6TYQ4
      Related
      ENSMMUP00000026529.4, ENSMMUT00000028349.4
      Conserved Domains (1) summary
      pfam16019
      Location:136 → 357
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. XM_015131308.2 → XP_014986794.1  cysteine/serine-rich nuclear protein 1 isoform X1

      Conserved Domains (1) summary
      pfam16019
      Location:229 → 450
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.