U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    VSIG4 V-set and immunoglobulin domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709685, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    VSIG4provided by VGNC
    Official Full Name
    V-set and immunoglobulin domain containing 4provided by VGNC
    Primary source
    VGNC:VGNC:79062
    See related
    Ensembl:ENSMMUG00000002750
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See VSIG4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (62624541..62643140, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (60238007..60256629, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene cyclin-Y-like protein 1 Neighboring gene microRNA mir-223 Neighboring gene ataxin-7-like protein 3 pseudogene Neighboring gene eukaryotic translation initiation factor 4B-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables complement component C3b binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of complement activation, alternative pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of interleukin-2 production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of macrophage activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    V-set and immunoglobulin domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      62624541..62643140 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841903.1 → XP_028697736.1  V-set and immunoglobulin domain-containing protein 4 isoform X4

      Conserved Domains (2) summary
      cd16082
      Location:151 → 236
      IgC_CRIg; Immunoglobulin (Ig) constant domain in complement receptor of the immunoglobulin superfamily (CRIg)
      cd16089
      Location:31 → 142
      IgV_CRIg; Immunoglobulin variable (IgV)-like domain in complement receptor of the immunoglobulin superfamily (CRIg)

    2. XM_015127593.2 → XP_014983079.1  V-set and immunoglobulin domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      F7HIJ2, G7NRS4
      Related
      ENSMMUP00000003690.4, ENSMMUT00000003906.4
      Conserved Domains (3) summary
      cd00096
      Location:166 → 228
      Ig; Immunoglobulin domain
      smart00410
      Location:159 → 228
      IG_like; Immunoglobulin like
      cl11960
      Location:40 → 141
      Ig; Immunoglobulin domain

    3. XM_028841902.1 → XP_028697735.1  V-set and immunoglobulin domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      G7NRS4
      Conserved Domains (2) summary
      cd16082
      Location:151 → 236
      IgC_CRIg; Immunoglobulin (Ig) constant domain in complement receptor of the immunoglobulin superfamily (CRIg)
      cd16089
      Location:31 → 142
      IgV_CRIg; Immunoglobulin variable (IgV)-like domain in complement receptor of the immunoglobulin superfamily (CRIg)

    4. XM_015127595.2 → XP_014983081.1  V-set and immunoglobulin domain-containing protein 4 isoform X6

      UniProtKB/TrEMBL
      G7NRS4
      Conserved Domains (3) summary
      cd00096
      Location:166 → 228
      Ig; Immunoglobulin domain
      smart00410
      Location:159 → 228
      IG_like; Immunoglobulin like
      cl11960
      Location:40 → 141
      Ig; Immunoglobulin domain

    5. XM_015127596.1 → XP_014983082.1  V-set and immunoglobulin domain-containing protein 4 isoform X7

      UniProtKB/TrEMBL
      A0A5F8AL07
      Related
      ENSMMUP00000078083.1, ENSMMUT00000080319.1
      Conserved Domains (1) summary
      cl11960
      Location:40 → 141
      Ig; Immunoglobulin domain

    6. XM_001099264.2 → XP_001099264.2  V-set and immunoglobulin domain-containing protein 4 isoform X1

      See identical proteins and their annotated locations for XP_001099264.2

      UniProtKB/TrEMBL
      A0A5F8ACF7, G7NRS4
      Related
      ENSMMUP00000075618.1, ENSMMUT00000084584.1
      Conserved Domains (3) summary
      cd00096
      Location:166 → 228
      Ig; Immunoglobulin domain
      smart00410
      Location:159 → 228
      IG_like; Immunoglobulin like
      cl11960
      Location:40 → 141
      Ig; Immunoglobulin domain

    7. XM_015127594.1 → XP_014983080.1  V-set and immunoglobulin domain-containing protein 4 isoform X5

      UniProtKB/TrEMBL
      G7NRS4
      Conserved Domains (3) summary
      cd00096
      Location:166 → 228
      Ig; Immunoglobulin domain
      smart00410
      Location:159 → 228
      IG_like; Immunoglobulin like
      cl11960
      Location:40 → 141
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.