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    CLNS1A chloride nucleotide-sensitive channel 1A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699904, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLNS1Aprovided by VGNC
    Official Full Name
    chloride nucleotide-sensitive channel 1Aprovided by VGNC
    Primary source
    VGNC:VGNC:71261
    See related
    Ensembl:ENSMMUG00000018945
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLNS1A in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (70691570..70714704, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (69823579..69846727, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993393 Neighboring gene aquaporin 11 Neighboring gene remodeling and spacing factor 1 Neighboring gene 40S ribosomal protein S20 pseudogene Neighboring gene adipogenesis associated Mth938 domain containing Neighboring gene uncharacterized LOC114672364

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA cis splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of methylosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pICln-Sm protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methylosome subunit pICln

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      70691570..70714704 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833858.1 → XP_028689691.1  methylosome subunit pICln isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZRB4, A0A8J8XYT0, F6YKF9, F7A857, G7NEE5
      Related
      ENSMMUP00000036815.3, ENSMMUT00000043829.3
      Conserved Domains (1) summary
      pfam03517
      Location:35 → 137
      Voldacs; Regulator of volume decrease after cellular swelling

    2. XM_028833860.1 → XP_028689693.1  methylosome subunit pICln isoform X2

      Conserved Domains (1) summary
      cl17171
      Location:35 → 84
      PH-like; Pleckstrin homology-like domain

    3. XM_028833859.1 → XP_028689692.1  methylosome subunit pICln isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZRB4, A0A8J8XYT0, F6YKF9, F7A857, G7NEE5
      Related
      ENSMMUP00000067178.1, ENSMMUT00000086569.1
      Conserved Domains (1) summary
      pfam03517
      Location:35 → 137
      Voldacs; Regulator of volume decrease after cellular swelling
    Nucleotide Protein
    Heading Accession and Version

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