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    ODF2L outer dense fiber of sperm tails 2 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715193, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ODF2Lprovided by VGNC
    Official Full Name
    outer dense fiber of sperm tails 2 likeprovided by VGNC
    Primary source
    VGNC:VGNC:75482
    See related
    Ensembl:ENSMMUG00000001380
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ODF2L in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (138081030..138129145)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (86535638..86583750, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene chloride channel accessory 1 Neighboring gene chloride channel accessory 2 Neighboring gene uncharacterized LOC106999515 Neighboring gene uncharacterized LOC114671742 Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene uncharacterized LOC106999510

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein BCAP

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      138081030..138129145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144288.2 → XP_014999774.1  protein BCAP isoform X2

      UniProtKB/TrEMBL
      F7D5Z0
      Related
      ENSMMUP00000001837.3, ENSMMUT00000001950.4
      Conserved Domains (2) summary
      COG1196
      Location:41 → 342
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:384 → 626
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. XM_015144298.2 → XP_014999784.1  protein BCAP isoform X3

      UniProtKB/TrEMBL
      F7D5Z0
      Conserved Domains (1) summary
      cl23720
      Location:307 → 429
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    3. XM_015144313.2 → XP_014999799.1  protein BCAP isoform X3

      UniProtKB/TrEMBL
      F7D5Z0
      Conserved Domains (1) summary
      cl23720
      Location:307 → 429
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    4. XM_015144280.2 → XP_014999766.1  protein BCAP isoform X1

      UniProtKB/TrEMBL
      F7D0W8, F7D5Z0
      Related
      ENSMMUP00000001840.4, ENSMMUT00000001953.4
      Conserved Domains (1) summary
      cl23720
      Location:341 → 463
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    5. XM_028831800.1 → XP_028687633.1  protein BCAP isoform X4

      Conserved Domains (2) summary
      COG1196
      Location:2 → 314
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:206 → 489
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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