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    SLC48A1 solute carrier family 48 member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704304, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC48A1provided by VGNC
    Official Full Name
    solute carrier family 48 member 1provided by VGNC
    Primary source
    VGNC:VGNC:77776
    See related
    Ensembl:ENSMMUG00000049514
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC48A1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (47308894..47333318)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (45974567..45998314)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene endonuclease, poly(U) specific Neighboring gene uncharacterized LOC114670834 Neighboring gene Rap guanine nucleotide exchange factor 3 Neighboring gene histone deacetylase 7 Neighboring gene vitamin D receptor Neighboring gene uncharacterized LOC107000846 Neighboring gene transmembrane protein 106C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heme transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heme transporter HRG1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194110.2 → NP_001181039.1  heme transporter HRG1

      See identical proteins and their annotated locations for NP_001181039.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000060
      UniProtKB/TrEMBL
      F6YJR1
      Related
      ENSMMUP00000068354.1, ENSMMUT00000085984.1
      Conserved Domains (1) summary
      pfam16954
      Location:71 → 122
      HRG; Haem-transporter, endosomal/lysosomal, haem-responsive gene

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      47308894..47333318
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828866.1 → XP_028684699.1  heme transporter HRG1 isoform X1

      Conserved Domains (1) summary
      pfam16954
      Location:57 → 107
      HRG; Haem-transporter, endosomal/lysosomal, haem-responsive gene

    2. XM_015151476.2 → XP_015006962.1  heme transporter HRG1 isoform X1

      Conserved Domains (1) summary
      pfam16954
      Location:57 → 107
      HRG; Haem-transporter, endosomal/lysosomal, haem-responsive gene

    3. XM_015151475.2 → XP_015006961.1  heme transporter HRG1 isoform X1

      Conserved Domains (1) summary
      pfam16954
      Location:57 → 107
      HRG; Haem-transporter, endosomal/lysosomal, haem-responsive gene
    Nucleotide Protein
    Heading Accession and Version

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