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    PDCD6 programmed cell death 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 723043, updated on 5-Mar-2024

    Summary

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    Gene symbol
    PDCD6
    Gene description
    programmed cell death 6
    See related
    Ensembl:ENSMMUG00000000752
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PDCD6 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (239254..279263)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (241598..286786)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678723 Neighboring gene coiled-coil domain containing 127 Neighboring gene succinate dehydrogenase complex flavoprotein subunit A Neighboring gene dendritic arbor reduction protein 1-like Neighboring gene uncharacterized LOC114678725 Neighboring gene aryl-hydrocarbon receptor repressor Neighboring gene translation initiation factor IF-3, mitochondrial-like Neighboring gene protein FAM136A pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    programmed cell death protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      239254..279263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849302.1 → XP_028705135.1  programmed cell death protein 6 isoform X1

      UniProtKB/TrEMBL
      H9EN72
      Related
      ENSMMUP00000077903.1, ENSMMUT00000094737.1
      Conserved Domains (1) summary
      cd16183
      Location:27 → 191
      EFh_PEF_ALG-2; EF-hand, calcium binding motif, found in apoptosis-linked gene 2 protein (ALG-2) and similar proteins

    2. XM_028849303.1 → XP_028705136.1  programmed cell death protein 6 isoform X2

      UniProtKB/TrEMBL
      H9FNC2
      Conserved Domains (1) summary
      cd16183
      Location:27 → 189
      EFh_PEF_ALG-2; EF-hand, calcium binding motif, found in apoptosis-linked gene 2 protein (ALG-2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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