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    TCF12 transcription factor 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699626, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TCF12provided by VGNC
    Official Full Name
    transcription factor 12provided by VGNC
    Primary source
    VGNC:VGNC:78283
    See related
    Ensembl:ENSMMUG00000004091
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TCF12 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (33315517..33691333)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (33387989..33761966)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 280D Neighboring gene acyl-CoA-binding domain-containing protein 7 pseudogene Neighboring gene uncharacterized LOC114679413 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC100429309 Neighboring gene uncharacterized LOC114679414 Neighboring gene uncharacterized LOC114679415

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      33315517..33691333
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850968.1 → XP_028706801.1  transcription factor 12 isoform X1

      UniProtKB/TrEMBL
      F6ZC50, F6ZC73, H9EME6
      Conserved Domains (1) summary
      cd18945
      Location:595 → 679
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    2. XM_028850969.1 → XP_028706802.1  transcription factor 12 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q700, A0A1D5QGF6, H9EME7
      Conserved Domains (1) summary
      cd18945
      Location:571 → 655
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    3. XM_015142321.2 → XP_014997807.1  transcription factor 12 isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q700
      Conserved Domains (1) summary
      cd18945
      Location:537 → 621
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    4. XM_028850971.1 → XP_028706804.1  transcription factor 12 isoform X7

      UniProtKB/TrEMBL
      A0A1D5Q700
      Related
      ENSMMUP00000043816.2, ENSMMUT00000060593.2
      Conserved Domains (1) summary
      cd18945
      Location:513 → 597
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    5. XM_015142316.2 → XP_014997802.1  transcription factor 12 isoform X1

      UniProtKB/TrEMBL
      F6ZC50, F6ZC73, H9EME6
      Related
      ENSMMUP00000005474.3, ENSMMUT00000005812.4
      Conserved Domains (1) summary
      cd18945
      Location:595 → 679
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    6. XM_015142317.2 → XP_014997803.1  transcription factor 12 isoform X2

      UniProtKB/TrEMBL
      F6ZC50
      Conserved Domains (1) summary
      cd18945
      Location:594 → 678
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    7. XM_015142318.2 → XP_014997804.1  transcription factor 12 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q700, A0A1D5QGF6, H9EME7
      Related
      ENSMMUP00000047126.2, ENSMMUT00000055022.2
      Conserved Domains (1) summary
      cd18945
      Location:571 → 655
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    8. XM_015142319.2 → XP_014997805.1  transcription factor 12 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q700
      Conserved Domains (1) summary
      cd18945
      Location:570 → 654
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    9. XM_028850970.1 → XP_028706803.1  transcription factor 12 isoform X5

      UniProtKB/TrEMBL
      F6ZC50
      Related
      ENSMMUP00000005476.4, ENSMMUT00000005814.4
      Conserved Domains (1) summary
      smart00353
      Location:565 → 618
      HLH; helix loop helix domain

    10. XM_015142322.2 → XP_014997808.1  transcription factor 12 isoform X8

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:493 → 577
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    11. XM_015142325.2 → XP_014997811.1  transcription factor 12 isoform X11

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:400 → 484
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    12. XM_015142323.2 → XP_014997809.1  transcription factor 12 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QS24, G7MXJ0
      Related
      ENSMMUP00000050852.2, ENSMMUT00000069301.2
      Conserved Domains (1) summary
      cd18945
      Location:425 → 509
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    13. XM_015142324.2 → XP_014997810.1  transcription factor 12 isoform X10

      UniProtKB/TrEMBL
      G7MXJ0
      Conserved Domains (1) summary
      cd18945
      Location:401 → 485
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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