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    ACBD6 acyl-CoA binding domain containing 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716418, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ACBD6provided by VGNC
    Official Full Name
    acyl-CoA binding domain containing 6provided by VGNC
    Primary source
    VGNC:VGNC:69510
    Locus tag
    EGK_01888
    See related
    Ensembl:ENSMMUG00000012051
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ACBD6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (37476173..37703463, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (186922088..187131413)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene centrosomal protein 350 Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene LIM homeobox 4 Neighboring gene U6 spliceosomal RNA Neighboring gene voltage-dependent anion-selective channel protein 1 pseudogene Neighboring gene uncharacterized LOC106994608 Neighboring gene xenotropic and polytropic retrovirus receptor 1 Neighboring gene ribonuclease H2 subunit C pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty-acyl-CoA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-CoA-binding domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261348.2 → NP_001248277.1  acyl-CoA-binding domain-containing protein 6

      See identical proteins and their annotated locations for NP_001248277.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048444
      UniProtKB/TrEMBL
      A0A8J8XRP3, F7HFY8, G7MF57
      Related
      ENSMMUP00000015806.2, ENSMMUT00000016877.4
      Conserved Domains (4) summary
      cd00204
      Location:165 → 261
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam00887
      Location:44 → 123
      ACBP; Acyl CoA binding protein
      pfam12796
      Location:166 → 255
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:191 → 222
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      37476173..37703463 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845594.1 → XP_028701427.1  acyl-CoA-binding domain-containing protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QZY3
      Related
      ENSMMUP00000053616.2, ENSMMUT00000069400.2
      Conserved Domains (3) summary
      sd00045
      Location:191 → 222
      ANK; ANK repeat [structural motif]
      pfam00887
      Location:44 → 123
      ACBP; Acyl CoA binding protein
      pfam12796
      Location:166 → 231
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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