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    SAMD4B sterile alpha motif domain containing 4B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696615, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SAMD4Bprovided by VGNC
    Official Full Name
    sterile alpha motif domain containing 4Bprovided by VGNC
    Primary source
    VGNC:VGNC:77102
    Locus tag
    EGK_10596
    See related
    Ensembl:ENSMMUG00000023802
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SAMD4B in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (38592479..38634948)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (35089321..35132527)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and fibronectin type III domain containing 1 Neighboring gene glia maturation factor gamma Neighboring gene PAF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene mediator complex subunit 29

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation repressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA stability IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Smaug homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      38592479..38634948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015123902.2 → XP_014979388.1  protein Smaug homolog 2

      UniProtKB/TrEMBL
      A0A1D5Q1Z5, A0A1D5QI86, A0A1D5RK45, A0A8J8XKG0, F7HRA8, G7NNK7
      Related
      ENSMMUP00000042057.1, ENSMMUT00000073268.2
      Conserved Domains (1) summary
      cd09557
      Location:296 → 358
      SAM_Smaug; SAM domain of Smaug subfamily

    2. XM_015123901.2 → XP_014979387.1  protein Smaug homolog 2

      UniProtKB/TrEMBL
      A0A1D5Q1Z5, A0A1D5QI86, A0A1D5RK45, A0A8J8XKG0, F7HRA8, G7NNK7
      Related
      ENSMMUP00000031348.4, ENSMMUT00000033494.4
      Conserved Domains (1) summary
      cd09557
      Location:296 → 358
      SAM_Smaug; SAM domain of Smaug subfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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