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    ISY1 ISY1 splicing factor homolog [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705746, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ISY1
    Gene description
    ISY1 splicing factor homolog
    See related
    Ensembl:ENSMMUG00000011580
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ISY1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (147358609..147394542)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (50345389..50379937, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene CCHC-type zinc finger nucleic acid binding protein Neighboring gene 60S ribosomal protein L17 Neighboring gene RAB43, member RAS oncogene family Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in generation of catalytic spliceosome for second transesterification step IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA 3'-splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Prp19 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of post-spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor ISY1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      147358609..147394542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001094091.4 → XP_001094091.1  pre-mRNA-splicing factor ISY1 homolog

      UniProtKB/TrEMBL
      A0A1D5QH00, F6PPC1
      Related
      ENSMMUP00000047320.2, ENSMMUT00000057619.2
      Conserved Domains (1) summary
      pfam06246
      Location:78 → 343
      Isy1; Isy1-like splicing family
    Nucleotide Protein
    Heading Accession and Version

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