U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZNF652 zinc finger protein 652 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699084, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZNF652provided by VGNC
    Official Full Name
    zinc finger protein 652provided by VGNC
    Primary source
    VGNC:VGNC:99354
    Locus tag
    EGK_08499
    See related
    Ensembl:ENSMMUG00000003453
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZNF652 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (47435427..47502608)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (40193927..40263167)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100429126 Neighboring gene prohibitin 1 Neighboring gene U7 small nuclear RNA Neighboring gene microRNA mir-6129 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein 652

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266395.1 → NP_001253324.1  zinc finger protein 652

      See identical proteins and their annotated locations for NP_001253324.1

      Status: PROVISIONAL

      Source sequence(s)
      JU471697
      UniProtKB/TrEMBL
      A0A8J8YA33, F7F4P3, G7NHE7
      Related
      ENSMMUP00000034905.1, ENSMMUT00000041895.3
      Conserved Domains (3) summary
      COG5048
      Location:439 → 488
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:387 → 407
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:455 → 478
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      47435427..47502608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835493.1 → XP_028691326.1  zinc finger protein 652 isoform X3

      Conserved Domains (5) summary
      PLN03086
      Location:240 → 304
      PLN03086; PRLI-interacting factor K; Provisional
      COG5189
      Location:345 → 401
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:331 → 348
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:247 → 266
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:368 → 392
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015119236.2 → XP_014974722.1  zinc finger protein 652 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YA33, F7F4P3, G7NHE7
      Conserved Domains (3) summary
      COG5048
      Location:439 → 488
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:387 → 407
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:455 → 478
      zf-H2C2_2; Zinc-finger double domain

    3. XM_028835492.1 → XP_028691325.1  zinc finger protein 652 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:439 → 488
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:381 → 464
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:387 → 407
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.