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    SCAND3 SCAN domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708122, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SCAND3provided by VGNC
    Official Full Name
    SCAN domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:81608
    See related
    Ensembl:ENSMMUG00000004619
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZBED9
    Orthologs
    human all
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    Genomic context

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    See SCAND3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (141651218..141668410)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (29002759..29046889, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene transfer RNA isoleucine (anticodon UAU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SCAN domain-containing protein 3
    Names
    zinc finger BED-type containing 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      141651218..141668410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847748.1 → XP_028703581.1  SCAN domain-containing protein 3 isoform X2

    2. XM_001101327.4 → XP_001101327.2  SCAN domain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RDG5, A0A8J8Y086, F6Q028, G7MRB7
      Related
      ENSMMUP00000006147.3, ENSMMUT00000006535.4
      Conserved Domains (1) summary
      smart00431
      Location:48 → 160
      SCAN; leucine rich region
    Nucleotide Protein
    Heading Accession and Version

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