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    ARMC9 armadillo repeat containing 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711891, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARMC9provided by VGNC
    Official Full Name
    armadillo repeat containing 9provided by VGNC
    Primary source
    VGNC:VGNC:69870
    Locus tag
    EGK_04886
    See related
    Ensembl:ENSMMUG00000011775
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARMC9 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (118627562..118811267)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (113641111..113827685)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, non-ATPase 1 Neighboring gene U1 spliceosomal RNA Neighboring gene 5-hydroxytryptamine receptor 2B Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 Neighboring gene small nucleolar RNA SNORA75 Neighboring gene nucleolin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary tip IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lisH domain-containing protein ARMC9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      118627562..118811267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001113129.4 → XP_001113129.3  lisH domain-containing protein ARMC9 isoform X5

      UniProtKB/TrEMBL
      G7N951
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:631 → 815
      PHA03307; transcriptional regulator ICP4; Provisional

    2. XM_015111332.2 → XP_014966818.2  lisH domain-containing protein ARMC9 isoform X3

      UniProtKB/TrEMBL
      A0A5F8ARJ7
      Related
      ENSMMUP00000080575.1, ENSMMUT00000082065.1
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      pfam03154
      Location:627 → 785
      Atrophin-1; Atrophin-1 family

    3. XM_015111334.2 → XP_014966820.2  lisH domain-containing protein ARMC9 isoform X4

      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      pfam03154
      Location:627 → 784
      Atrophin-1; Atrophin-1 family

    4. XM_028831207.1 → XP_028687040.1  lisH domain-containing protein ARMC9 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZET0, A0A5F8AHM2
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:631 → 869
      PHA03307; transcriptional regulator ICP4; Provisional

    5. XM_015111336.2 → XP_014966822.2  lisH domain-containing protein ARMC9 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RFN7, G7N951
      Related
      ENSMMUP00000059131.2, ENSMMUT00000075228.2
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:631 → 815
      PHA03307; transcriptional regulator ICP4; Provisional

    6. XM_028831209.1 → XP_028687042.1  lisH domain-containing protein ARMC9 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AHM2
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:631 → 868
      PHA03307; transcriptional regulator ICP4; Provisional

    7. XM_015111339.2 → XP_014966825.2  lisH domain-containing protein ARMC9 isoform X7

      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03378
      Location:626 → 763
      PHA03378; EBNA-3B; Provisional

    8. XM_015111341.2 → XP_014966827.1  lisH domain-containing protein ARMC9 isoform X9

      UniProtKB/TrEMBL
      A0A5F7ZUM1
      Related
      ENSMMUP00000015465.4, ENSMMUT00000016506.4

    9. XM_028831211.1 → XP_028687044.1  lisH domain-containing protein ARMC9 isoform X8

      UniProtKB/TrEMBL
      A0A5F8AT39
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:522 → 760
      PHA03307; transcriptional regulator ICP4; Provisional

    10. XM_028831208.1 → XP_028687041.1  lisH domain-containing protein ARMC9 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZET0, A0A5F8AHM2
      Related
      ENSMMUP00000063691.1, ENSMMUT00000092774.1
      Conserved Domains (2) summary
      smart00667
      Location:7 → 38
      LisH; Lissencephaly type-1-like homology motif
      PHA03307
      Location:631 → 869
      PHA03307; transcriptional regulator ICP4; Provisional

    11. XM_028831212.1 → XP_028687045.1  lisH domain-containing protein ARMC9 isoform X10

      UniProtKB/TrEMBL
      A0A5F8AT39
      Conserved Domains (1) summary
      PTZ00449
      Location:438 → 611
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional

    RNA

    1. XR_001438804.2 RNA Sequence

    2. XR_001438805.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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