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    PAIP1 poly(A) binding protein interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700869, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PAIP1provided by VGNC
    Official Full Name
    poly(A) binding protein interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:84476
    See related
    Ensembl:ENSMMUG00000011878
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PAIP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (43513787..43592598, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (44291411..44322698, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 267 Neighboring gene chromosome 6 C5orf34 homolog Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like Neighboring gene nicotinamide nucleotide transhydrogenase Neighboring gene RNA-binding motif protein, X chromosome-like Neighboring gene dnaJ homolog subfamily C member 8 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyadenylate-binding protein-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266304.1 → NP_001253233.1  polyadenylate-binding protein-interacting protein 1

      See identical proteins and their annotated locations for NP_001253233.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474022
      UniProtKB/TrEMBL
      A0A5F8AIY9, F7H0R2, H9Z4G0
      Related
      ENSMMUP00000015596.4, ENSMMUT00000016650.4
      Conserved Domains (2) summary
      PRK14951
      Location:35 → 124
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam02854
      Location:161 → 377
      MIF4G; MIF4G domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      43513787..43592598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849148.1 → XP_028704981.1  polyadenylate-binding protein-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AIY9, F7H0Q6
      Related
      ENSMMUP00000015599.3, ENSMMUT00000016653.4
      Conserved Domains (2) summary
      pfam02854
      Location:48 → 264
      MIF4G; MIF4G domain
      pfam07145
      Location:13 → 28
      PAM2; Ataxin-2 C-terminal region

    2. XM_015139971.2 → XP_014995457.1  polyadenylate-binding protein-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AIY9, F7H0Q6
      Related
      ENSMMUP00000070318.1, ENSMMUT00000101229.1
      Conserved Domains (2) summary
      pfam02854
      Location:48 → 264
      MIF4G; MIF4G domain
      pfam07145
      Location:13 → 28
      PAM2; Ataxin-2 C-terminal region

    3. XM_015139970.2 → XP_014995456.1  polyadenylate-binding protein-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AIY9, H9FNU7
      Related
      ENSMMUP00000076970.1, ENSMMUT00000085988.1
      Conserved Domains (2) summary
      pfam07145
      Location:45 → 61
      PAM2; Ataxin-2 C-terminal region
      pfam02854
      Location:81 → 297
      MIF4G; MIF4G domain

    4. XM_028849147.1 → XP_028704980.1  polyadenylate-binding protein-interacting protein 1 isoform X1

      Conserved Domains (2) summary
      PHA03247
      Location:37 → 134
      PHA03247; large tegument protein UL36; Provisional
      pfam02854
      Location:161 → 377
      MIF4G; MIF4G domain

    5. XM_028849149.1 → XP_028704982.1  polyadenylate-binding protein-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AIY9, F7H0Q6
      Related
      ENSMMUP00000015597.3, ENSMMUT00000016651.4
      Conserved Domains (2) summary
      pfam02854
      Location:48 → 264
      MIF4G; MIF4G domain
      pfam07145
      Location:13 → 28
      PAM2; Ataxin-2 C-terminal region

    6. XM_015139972.2 → XP_014995458.1  polyadenylate-binding protein-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AIY9, F7H0Q6
      Conserved Domains (2) summary
      pfam02854
      Location:48 → 264
      MIF4G; MIF4G domain
      pfam07145
      Location:13 → 28
      PAM2; Ataxin-2 C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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