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    RBM27 RNA binding motif protein 27 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707688, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RBM27
    Gene description
    RNA binding motif protein 27
    Locus tag
    EGK_16983
    See related
    Ensembl:ENSMMUG00000004476
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBM27 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (143622689..143710250)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (144238960..144337354)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene PLAC8 like 1 Neighboring gene leucyl-tRNA synthetase 1 Neighboring gene POU class 4 homeobox 3 Neighboring gene transcription elongation regulator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261062.1 → NP_001247991.1  RNA-binding protein 27

      See identical proteins and their annotated locations for NP_001247991.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476072
      UniProtKB/TrEMBL
      A0A1D5QID4, A0A8J8YHH9, F7GIP2, G7MVE0
      Related
      ENSMMUP00000074602.1, ENSMMUT00000081403.1
      Conserved Domains (5) summary
      cd12517
      Location:599 → 674
      RRM_RBM27; RNA recognition motif of vertebrate RNA-binding protein 27 (RBM27)
      pfam00642
      Location:277 → 299
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      cl02562
      Location:7 → 72
      PWI; PWI domain
      cl17169
      Location:971 → 1013
      RRM_SF; RNA recognition motif (RRM) superfamily
      cl19219
      Location:813 → 902
      DUF342; Protein of unknown function (DUF342)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      143622689..143710250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015141102.2 → XP_014996588.1  RNA-binding protein 27 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QID4, A0A5F7ZF91
      Related
      ENSMMUP00000063299.1, ENSMMUT00000100837.1
      Conserved Domains (5) summary
      cd12517
      Location:544 → 619
      RRM_RBM27; RNA recognition motif of vertebrate RNA-binding protein 27 (RBM27)
      pfam00642
      Location:277 → 299
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      cl02562
      Location:7 → 72
      PWI; PWI domain
      cl17169
      Location:916 → 958
      RRM_SF; RNA recognition motif (RRM) superfamily
      cl19219
      Location:758 → 847
      DUF342; Protein of unknown function (DUF342)
    Nucleotide Protein
    Heading Accession and Version

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