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    SPATA20 spermatogenesis associated 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703313, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPATA20provided by VGNC
    Official Full Name
    spermatogenesis associated 20provided by VGNC
    Primary source
    VGNC:VGNC:77993
    Locus tag
    EGK_08527
    See related
    Ensembl:ENSMMUG00000017252
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPATA20 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (46231397..46240783, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (38994522..39003463, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 3 Neighboring gene uncharacterized LOC114673133 Neighboring gene uncharacterized LOC106993999 Neighboring gene calcium voltage-gated channel subunit alpha1 G Neighboring gene uncharacterized LOC106994000 Neighboring gene epsin 3 Neighboring gene MYCBP associated protein Neighboring gene uncharacterized LOC114673134

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      46231397..46240783 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001099418.4 → XP_001099418.1  spermatogenesis-associated protein 20 isoform X2

      See identical proteins and their annotated locations for XP_001099418.1

      UniProtKB/TrEMBL
      A0A8J8YSF8, F7H9M1, G7NHM4
      Related
      ENSMMUP00000072776.1, ENSMMUT00000106053.1
      Conserved Domains (2) summary
      COG1331
      Location:57 → 784
      YyaL; Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only]
      pfam03190
      Location:62 → 223
      Thioredox_DsbH; Protein of unknown function, DUF255

    2. XM_015119297.2 → XP_014974783.1  spermatogenesis-associated protein 20 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A740, A0A5F8ADW9
      Related
      ENSMMUP00000076067.1, ENSMMUT00000087308.1
      Conserved Domains (1) summary
      COG1331
      Location:57 → 784
      YyaL; Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only]

    3. XM_028836368.1 → XP_028692201.1  spermatogenesis-associated protein 20 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A740, A0A5F8ADW9
      Conserved Domains (1) summary
      COG1331
      Location:57 → 784
      YyaL; Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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