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    PHC2 polyhomeotic homolog 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710201, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHC2provided by VGNC
    Official Full Name
    polyhomeotic homolog 2provided by VGNC
    Primary source
    VGNC:VGNC:75903
    See related
    Ensembl:ENSMMUG00000003269
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (191209018..191320951)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (32450645..32563840, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene CUB and Sushi multiple domains 2 Neighboring gene proteasome subunit alpha type-3-like Neighboring gene zinc finger and SCAN domain containing 20 Neighboring gene uncharacterized LOC114673124 Neighboring gene alpha 1,3-galactosyltransferase 2 Neighboring gene zinc finger protein 362

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PRC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyhomeotic-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      191209018..191320951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836295.1 → XP_028692128.1  polyhomeotic-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5S6RCU2, A0A8J8Y6R3, F7GQB5, G7MIA6
      Related
      ENSMMUP00000040441.3, ENSMMUT00000047407.3
      Conserved Domains (4) summary
      cd09577
      Location:790 → 858
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:131 → 549
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:671 → 789
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    2. XM_015134686.2 → XP_014990172.2  polyhomeotic-like protein 2 isoform X1

      Conserved Domains (4) summary
      cd09577
      Location:812 → 880
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:128 → 571
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:693 → 811
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    3. XM_002802297.3 → XP_002802343.2  polyhomeotic-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5S6RCU2, A0A8J8Y6R3, F7GQB5, G7MIA6
      Conserved Domains (4) summary
      cd09577
      Location:790 → 858
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:131 → 549
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:671 → 789
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    4. XM_015134675.2 → XP_014990161.2  polyhomeotic-like protein 2 isoform X1

      Conserved Domains (4) summary
      cd09577
      Location:812 → 880
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:128 → 571
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:693 → 811
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    5. XM_015134719.2 → XP_014990205.2  polyhomeotic-like protein 2 isoform X3

      UniProtKB/TrEMBL
      F7FKN0
      Related
      ENSMMUP00000004363.4, ENSMMUT00000004629.4
      Conserved Domains (4) summary
      cd09577
      Location:761 → 829
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:193 → 520
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:642 → 760
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 176
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    6. XM_015134697.2 → XP_014990183.2  polyhomeotic-like protein 2 isoform X1

      Conserved Domains (4) summary
      cd09577
      Location:812 → 880
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:128 → 571
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:693 → 811
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    7. XM_001107739.4 → XP_001107739.3  polyhomeotic-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5S6RCU2, A0A8J8Y6R3, F7GQB5, G7MIA6
      Conserved Domains (4) summary
      cd09577
      Location:790 → 858
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:131 → 549
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:671 → 789
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
      cl26593
      Location:53 → 148
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    8. XM_028836304.1 → XP_028692137.1  polyhomeotic-like protein 2 isoform X4

      Conserved Domains (3) summary
      cd09577
      Location:516 → 584
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      PHA03247
      Location:92 → 275
      PHA03247; large tegument protein UL36; Provisional
      pfam16616
      Location:397 → 515
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2

    9. XM_015134741.2 → XP_014990227.1  polyhomeotic-like protein 2 isoform X5

      Conserved Domains (2) summary
      cd09577
      Location:254 → 322
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam16616
      Location:135 → 254
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2

    10. XM_028836315.1 → XP_028692148.1  polyhomeotic-like protein 2 isoform X5

      Conserved Domains (2) summary
      cd09577
      Location:254 → 322
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam16616
      Location:135 → 254
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2

    11. XM_015134735.2 → XP_014990221.1  polyhomeotic-like protein 2 isoform X5

      Conserved Domains (2) summary
      cd09577
      Location:254 → 322
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam16616
      Location:135 → 254
      PHC2_SAM_assoc; Unstructured region on Polyhomeotic-like protein 1 and 2
    Nucleotide Protein
    Heading Accession and Version

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