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    RFXANK regulatory factor X associated ankyrin containing protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719706, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RFXANKprovided by VGNC
    Official Full Name
    regulatory factor X associated ankyrin containing proteinprovided by VGNC
    Primary source
    VGNC:VGNC:76910
    Locus tag
    EGK_10354
    See related
    Ensembl:ENSMMUG00000010722
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RFXANK in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (18781979..18793856)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (19293970..19307190)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 161A Neighboring gene myocyte enhancer factor 2B Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene nuclear receptor 2C2 associated protein Neighboring gene neurocan Neighboring gene U6 spliceosomal RNA Neighboring gene hyaluronan and proteoglycan link protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding protein RFXANK
    Names
    Regulatory factor X subunit B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194670.2 → NP_001181599.1  DNA-binding protein RFXANK

      See identical proteins and their annotated locations for NP_001181599.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000224
      UniProtKB/TrEMBL
      A0A1D5R269, A0A8J8XIV3, G7NNG5
      Conserved Domains (3) summary
      COG0666
      Location:73 → 258
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:128 → 218
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      18781979..18793856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838542.1 → XP_028694375.1  DNA-binding protein RFXANK isoform X1

      Conserved Domains (3) summary
      COG0666
      Location:35 → 218
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:128 → 218
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_028838541.1 → XP_028694374.1  DNA-binding protein RFXANK isoform X1

      Conserved Domains (3) summary
      COG0666
      Location:35 → 218
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:128 → 218
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028838543.1 → XP_028694376.1  DNA-binding protein RFXANK isoform X2

      Conserved Domains (3) summary
      sd00045
      Location:122 → 153
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:93 → 143
      Ank_4; Ankyrin repeats (many copies)
      pfam12796
      Location:127 → 217
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_028838544.1 → XP_028694377.1  DNA-binding protein RFXANK isoform X5

      Conserved Domains (3) summary
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:94 → 144
      Ank_4; Ankyrin repeats (many copies)
      pfam12796
      Location:128 → 218
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_015123384.2 → XP_014978870.1  DNA-binding protein RFXANK isoform X6

      Conserved Domains (4) summary
      cd00204
      Location:118 → 237
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:128 → 217
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:94 → 144
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]

    6. XM_015123382.2 → XP_014978868.1  DNA-binding protein RFXANK isoform X3

      UniProtKB/TrEMBL
      A0A1D5R269, A0A8J8XIV3, G7NNG5
      Related
      ENSMMUP00000068761.1, ENSMMUT00000079584.1
      Conserved Domains (3) summary
      COG0666
      Location:73 → 258
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:123 → 154
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:128 → 218
      Ank_2; Ankyrin repeats (3 copies)

    7. XM_015123383.2 → XP_014978869.1  DNA-binding protein RFXANK isoform X4

      UniProtKB/TrEMBL
      H9G170
      Conserved Domains (3) summary
      COG0666
      Location:72 → 257
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:122 → 153
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:127 → 217
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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