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    SOD2 superoxide dismutase 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574097, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SOD2
    Gene description
    superoxide dismutase 2
    See related
    Ensembl:ENSMMUG00000050418
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SOD2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (10902818..10916241)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (160803675..160817084, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene U4atac minor spliceosomal RNA Neighboring gene heterogeneous nuclear ribonucleoprotein H2-like Neighboring gene uncharacterized LOC114677455 Neighboring gene fibronectin type III domain containing 1 Neighboring gene uncharacterized LOC114677457

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure, molecular evolution, and gene expression of primate superoxide dismutases. Fukuhara R, et al. Gene, 2002 Aug 21. PMID 12383507
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables superoxide dismutase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in superoxide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    superoxide dismutase [Mn], mitochondrial
    Names
    Mn-superoxide dismutase
    superoxide dismutase 2, mitochondrial
    NP_001027977.2
    XP_014992736.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032805.2 → NP_001027977.2  superoxide dismutase [Mn], mitochondrial

      See identical proteins and their annotated locations for NP_001027977.2

      Status: PROVISIONAL

      Source sequence(s)
      JU322403
      UniProtKB/TrEMBL
      G7MQZ6, H9EUV0
      Conserved Domains (1) summary
      COG0605
      Location:23 → 222
      SodA; Superoxide dismutase [Inorganic ion transport and metabolism]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      10902818..10916241
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137250.2 → XP_014992736.1  superoxide dismutase [Mn], mitochondrial isoform X1

      UniProtKB/TrEMBL
      G7MQZ6, H9EUV0
      Related
      ENSMMUP00000066699.1, ENSMMUT00000090705.1
      Conserved Domains (1) summary
      COG0605
      Location:23 → 222
      SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8HXP2.2 GenPept UniProtKB/Swiss-Prot:Q8HXP2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.