U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    THUMPD3 THUMP domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701564, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    THUMPD3provided by VGNC
    Official Full Name
    THUMP domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:79435
    See related
    Ensembl:ENSMMUG00000017307
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See THUMPD3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (140705051..140728877)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (57023534..57047341, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene SLIT-ROBO Rho GTPase activating protein 3 Neighboring gene uncharacterized LOC114676388 Neighboring gene phosphoglycerate mutase 1-like Neighboring gene uncharacterized LOC106996842 Neighboring gene uncharacterized LOC106996841 Neighboring gene SET domain containing 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA (guanine) methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    THUMP domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      140705051..140728877
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130340.2 → XP_014985826.1  THUMP domain-containing protein 3

      UniProtKB/TrEMBL
      F7H027, G7MKS8, H9FSL6
      Related
      ENSMMUP00000039703.2, ENSMMUT00000046669.3
      Conserved Domains (2) summary
      cd11715
      Location:40 → 286
      THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
      pfam01170
      Location:293 → 478
      UPF0020; Putative RNA methylase family UPF0020

    2. XM_015130341.2 → XP_014985827.1  THUMP domain-containing protein 3

      UniProtKB/TrEMBL
      F7H027, G7MKS8, H9FSL6
      Conserved Domains (2) summary
      cd11715
      Location:40 → 286
      THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
      pfam01170
      Location:293 → 478
      UPF0020; Putative RNA methylase family UPF0020

    3. XM_015130338.2 → XP_014985824.1  THUMP domain-containing protein 3

      UniProtKB/TrEMBL
      F7H027, G7MKS8, H9FSL6
      Conserved Domains (2) summary
      cd11715
      Location:40 → 286
      THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
      pfam01170
      Location:293 → 478
      UPF0020; Putative RNA methylase family UPF0020

    4. XM_015130339.2 → XP_014985825.1  THUMP domain-containing protein 3

      UniProtKB/TrEMBL
      F7H027, G7MKS8, H9FSL6
      Related
      ENSMMUP00000066385.1, ENSMMUT00000108460.1
      Conserved Domains (2) summary
      cd11715
      Location:40 → 286
      THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
      pfam01170
      Location:293 → 478
      UPF0020; Putative RNA methylase family UPF0020

    5. XM_015130342.2 → XP_014985828.1  THUMP domain-containing protein 3

      UniProtKB/TrEMBL
      F7H027, G7MKS8, H9FSL6
      Conserved Domains (2) summary
      cd11715
      Location:40 → 286
      THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
      pfam01170
      Location:293 → 478
      UPF0020; Putative RNA methylase family UPF0020
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.