U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZKSCAN7 zinc finger with KRAB and SCAN domains 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715300, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZKSCAN7provided by VGNC
    Official Full Name
    zinc finger with KRAB and SCAN domains 7provided by VGNC
    Primary source
    VGNC:VGNC:82274
    See related
    Ensembl:ENSMMUG00000011943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZKSCAN7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (100546303..100569775)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (98012516..98029842, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 445 Neighboring gene zinc finger protein 852 Neighboring gene etoposide-induced protein 2.4-like Neighboring gene uncharacterized LOC114676178 Neighboring gene zinc finger protein 660 Neighboring gene zinc finger protein 197 Neighboring gene zinc finger protein 35

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein with KRAB and SCAN domains 7

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      100546303..100569775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844021.1 → XP_028699854.1  zinc finger protein with KRAB and SCAN domains 7 isoform X4

      Conserved Domains (3) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      pfam14967
      Location:156 → 256
      FAM70; FAM70 protein
      pfam01352
      Location:224 → 264
      KRAB; KRAB box

    2. XM_028844020.1 → XP_028699853.1  zinc finger protein with KRAB and SCAN domains 7 isoform X4

      Conserved Domains (3) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      pfam14967
      Location:156 → 256
      FAM70; FAM70 protein
      pfam01352
      Location:224 → 264
      KRAB; KRAB box

    3. XM_015131198.2 → XP_014986684.2  zinc finger protein with KRAB and SCAN domains 7 isoform X1

      UniProtKB/TrEMBL
      F7HKJ0
      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:373 → 731
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:630 → 650
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_028844019.1 → XP_028699852.1  zinc finger protein with KRAB and SCAN domains 7 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:222 → 580
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:479 → 499
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:74 → 114
      KRAB; KRAB box

    5. XM_028844017.1 → XP_028699850.1  zinc finger protein with KRAB and SCAN domains 7 isoform X1

      UniProtKB/TrEMBL
      F7HKJ0
      Related
      ENSMMUP00000015660.4, ENSMMUT00000016724.4
      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:373 → 731
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:630 → 650
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_028844018.1 → XP_028699851.1  zinc finger protein with KRAB and SCAN domains 7 isoform X2

      Conserved Domains (4) summary
      smart00431
      Location:51 → 161
      SCAN; leucine rich region
      cd07765
      Location:224 → 263
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:372 → 730
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:629 → 649
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.