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    RREB1 ras responsive element binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693556, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RREB1provided by VGNC
    Official Full Name
    ras responsive element binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76939
    See related
    Ensembl:ENSMMUG00000007852
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RREB1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (162828454..162975062, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (7175961..7324905)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene cancer antigen 1 Neighboring gene 40S ribosomal protein S3 pseudogene Neighboring gene signal sequence receptor subunit 1 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114677414

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-responsive element-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      162828454..162975062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001082516.4 → XP_001082516.3  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Related
      ENSMMUP00000010323.3, ENSMMUT00000011008.4
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger

    2. XM_001082652.4 → XP_001082652.2  ras-responsive element-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      F7B7M4, H9ZC46
      Related
      ENSMMUP00000010324.3, ENSMMUT00000011009.4
      Conserved Domains (9) summary
      pfam05279
      Location:1414 → 1514
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1542 → 1564
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1528 → 1552
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1515 → 1536
      zf-C2H2_6; C2H2-type zinc finger

    3. XM_028847854.1 → XP_028703687.1  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger

    4. XM_028847852.1 → XP_028703685.1  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Related
      ENSMMUP00000010322.4, ENSMMUT00000011007.4
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger

    5. XM_028847853.1 → XP_028703686.1  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger

    6. XM_015135513.2 → XP_014990999.2  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger

    7. XM_015135512.2 → XP_014990998.2  ras-responsive element-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7B7N6, H9ZC48
      Conserved Domains (9) summary
      pfam05279
      Location:1469 → 1569
      Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
      smart00355
      Location:1247 → 1268
      ZnF_C2H2; zinc finger
      COG5048
      Location:64 → 246
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:68 → 88
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:792 → 814
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:671 → 695
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:1597 → 1619
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1583 → 1607
      zf-H2C2_2; Zinc-finger double domain
      pfam13912
      Location:1570 → 1591
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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