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    YIPF1 Yip1 domain family member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714632, updated on 5-Mar-2024

    Summary

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    Gene symbol
    YIPF1
    Gene description
    Yip1 domain family member 1
    See related
    Ensembl:ENSMMUG00000003546
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See YIPF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (170530331..170579206)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (53521867..53562173, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 42 Neighboring gene intraflagellar transport 25 Neighboring gene iodothyronine deiodinase 1 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene NDC1 transmembrane nucleoporin Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YIPF1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      170530331..170579206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833576.1 → XP_028689409.1  protein YIPF1

      UniProtKB/TrEMBL
      A0A5F8AD59, F6YLI1, F7CNA0
      Conserved Domains (1) summary
      pfam04893
      Location:86 → 268
      Yip1; Yip1 domain

    2. XM_015140058.2 → XP_014995544.2  protein YIPF1

      UniProtKB/TrEMBL
      A0A5F8AD59, F6YLI1, F7CNA0
      Related
      ENSMMUP00000040143.3, ENSMMUT00000047118.3
      Conserved Domains (1) summary
      pfam04893
      Location:86 → 268
      Yip1; Yip1 domain

    3. XM_028833575.1 → XP_028689408.1  protein YIPF1

      UniProtKB/TrEMBL
      A0A5F8AD59, F6YLI1, F7CNA0
      Related
      ENSMMUP00000001891.4, ENSMMUT00000002005.4
      Conserved Domains (1) summary
      pfam04893
      Location:86 → 268
      Yip1; Yip1 domain

    RNA

    1. XR_001445298.2 RNA Sequence

    2. XR_001445304.2 RNA Sequence

    3. XR_001445302.2 RNA Sequence

    4. XR_001445306.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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