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    LEMD3 LEM domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717597, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LEMD3provided by VGNC
    Official Full Name
    LEM domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:74145
    See related
    Ensembl:ENSMMUG00000016892
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LEMD3 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (64759833..64839306)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (63960906..64039322)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene WNT inhibitory factor 1 Neighboring gene MICOS complex subunit MIC26-like Neighboring gene uncharacterized LOC107000914 Neighboring gene methionine sulfoxide reductase B3 Neighboring gene 60S ribosomal protein L32 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear envelope organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inner nuclear membrane protein Man1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258094.1 → NP_001245023.1  inner nuclear membrane protein Man1

      See identical proteins and their annotated locations for NP_001245023.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474978
      UniProtKB/TrEMBL
      F7CQM6, H9FS87, H9Z766
      Related
      ENSMMUP00000022204.4, ENSMMUT00000023726.4
      Conserved Domains (3) summary
      cd12942
      Location:9 → 51
      LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
      cd12286
      Location:783 → 874
      RRM_Man1; RNA recognition motif in inner nuclear membrane protein Man1 (Man1) and similar proteins
      pfam09402
      Location:534 → 746
      MSC; Man1-Src1p-C-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      64759833..64839306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829027.1 → XP_028684860.1  inner nuclear membrane protein Man1 isoform X1

      UniProtKB/TrEMBL
      H9FS87
      Conserved Domains (3) summary
      cd12942
      Location:9 → 51
      LEM_Man1; LEM (Lap2/Emerin/Man1) domain found in inner nuclear membrane protein Man1
      cd12286
      Location:804 → 895
      RRM_Man1; RNA recognition motif in inner nuclear membrane protein Man1 (Man1) and similar proteins
      pfam09402
      Location:536 → 767
      MSC; Man1-Src1p-C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials