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    ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709547, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARNTL2provided by VGNC
    Official Full Name
    aryl hydrocarbon receptor nuclear translocator like 2provided by VGNC
    Primary source
    VGNC:VGNC:99889
    See related
    Ensembl:ENSMMUG00000023249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARNTL2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (28659140..28734560)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (28345990..28420817)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670816 Neighboring gene serine/threonine kinase 38 like Neighboring gene arginine--tRNA ligase, cytoplasmic-like Neighboring gene single-pass membrane protein with coiled-coil domains 2 Neighboring gene PPFIA binding protein 1 Neighboring gene uncharacterized protein C12orf71-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aryl hydrocarbon receptor nuclear translocator-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      28659140..28734560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829357.1 → XP_028685190.1  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X6

      Conserved Domains (2) summary
      pfam14598
      Location:261 → 363
      PAS_11; PAS domain
      pfam00010
      Location:144 → 197
      HLH; Helix-loop-helix DNA-binding domain

    2. XM_028829356.1 → XP_028685189.1  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X2

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00091
      Location:217 → 279
      PAS; PAS domain
      pfam14598
      Location:406 → 508
      PAS_11; PAS domain
      pfam00010
      Location:144 → 197
      HLH; Helix-loop-helix DNA-binding domain

    3. XM_028829355.1 → XP_028685188.1  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00091
      Location:217 → 279
      PAS; PAS domain
      pfam14598
      Location:406 → 508
      PAS_11; PAS domain
      pfam00010
      Location:144 → 197
      HLH; Helix-loop-helix DNA-binding domain

    4. XM_002798502.3 → XP_002798548.2  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X3

      UniProtKB/TrEMBL
      F7E673, G7N6L4
      Related
      ENSMMUP00000030596.2, ENSMMUT00000032698.3
      Conserved Domains (3) summary
      smart00091
      Location:181 → 243
      PAS; PAS domain
      cd11469
      Location:108 → 167
      bHLH-PAS_ARNTL2_PASD9; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 2 (ARNTL2) and similar proteins
      pfam14598
      Location:370 → 472
      PAS_11; PAS domain

    5. XM_001103326.4 → XP_001103326.3  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X4

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00091
      Location:167 → 229
      PAS; PAS domain
      cd11469
      Location:95 → 153
      bHLH-PAS_ARNTL2_PASD9; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 2 (ARNTL2) and similar proteins
      pfam14598
      Location:356 → 458
      PAS_11; PAS domain

    6. XM_002798503.3 → XP_002798549.2  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X5

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00091
      Location:133 → 195
      PAS; PAS domain
      cd11469
      Location:61 → 119
      bHLH-PAS_ARNTL2_PASD9; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 2 (ARNTL2) and similar proteins
      pfam14598
      Location:322 → 424
      PAS_11; PAS domain

    7. XM_028829358.1 → XP_028685191.1  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X7

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00353
      Location:1 → 41
      HLH; helix loop helix domain
      smart00091
      Location:59 → 121
      PAS; PAS domain
      pfam14598
      Location:248 → 350
      PAS_11; PAS domain

    8. XM_015151331.2 → XP_015006817.1  aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X7

      UniProtKB/TrEMBL
      G7N6L4
      Conserved Domains (3) summary
      smart00353
      Location:1 → 41
      HLH; helix loop helix domain
      smart00091
      Location:59 → 121
      PAS; PAS domain
      pfam14598
      Location:248 → 350
      PAS_11; PAS domain
    Nucleotide Protein
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