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    CDA cytidine deaminase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705913, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CDAprovided by VGNC
    Official Full Name
    cytidine deaminaseprovided by VGNC
    Primary source
    VGNC:VGNC:106338
    See related
    Ensembl:ENSMMUG00000056564
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CDA in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (204099620..204129838, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (19395454..19425258)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit Neighboring gene PTEN induced kinase 1 Neighboring gene uncharacterized LOC100424894 Neighboring gene eukaryotic translation initiation factor 4E type 3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytidine deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytidine deamination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytidine deaminase
    XP_001096632.2
    XP_028694378.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      204099620..204129838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001096632.4 → XP_001096632.2  cytidine deaminase isoform X1

      UniProtKB/TrEMBL
      A0A5F8A878, A0A8J8XB71, G7MHE0
      Related
      ENSMMUP00000073577.1, ENSMMUT00000094088.1
      Conserved Domains (1) summary
      TIGR01354
      Location:16 → 142
      cyt_deam_tetra; cytidine deaminase, homotetrameric

    2. XM_028838545.1 → XP_028694378.1  cytidine deaminase isoform X2

      Conserved Domains (1) summary
      TIGR01354
      Location:16 → 118
      cyt_deam_tetra; cytidine deaminase, homotetrameric
    Nucleotide Protein
    Heading Accession and Version

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