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    LAT linker for activation of T cells [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704656, updated on 5-Mar-2024

    Summary

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    Gene symbol
    LAT
    Gene description
    linker for activation of T cells
    See related
    Ensembl:ENSMMUG00000043332
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LAT in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (26738213..26744459, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (27195567..27201825, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene SH3 domain binding kinase 1 Neighboring gene SPNS lysolipid transporter 1, lysophospholipid Neighboring gene nuclear factor of activated T cells 2 interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    linker for activation of T-cells family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      26738213..26744459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125849.2 → XP_014981335.1  linker for activation of T-cells family member 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AGV8, F7EUV8
      Related
      ENSMMUP00000076636.1, ENSMMUT00000086570.1
      Conserved Domains (1) summary
      pfam15234
      Location:1 → 235
      LAT; Linker for activation of T-cells

    2. XM_015125850.2 → XP_014981336.1  linker for activation of T-cells family member 1 isoform X3

      UniProtKB/TrEMBL
      F7EUV8
      Conserved Domains (1) summary
      pfam15234
      Location:1 → 234
      LAT; Linker for activation of T-cells

    3. XM_028841025.1 → XP_028696858.1  linker for activation of T-cells family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RI21
      Conserved Domains (1) summary
      pfam15234
      Location:60 → 265
      LAT; Linker for activation of T-cells
    Nucleotide Protein
    Heading Accession and Version

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