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    NOP56 NOP56 ribonucleoprotein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718202, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NOP56provided by VGNC
    Official Full Name
    NOP56 ribonucleoproteinprovided by VGNC
    Primary source
    VGNC:VGNC:75181
    See related
    Ensembl:ENSMMUG00000013888
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NOP56 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (63840421..63846582, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (35480288..35486095)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene EBF family member 4 Neighboring gene small nucleolar RNA SNORD57 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene small nucleolar RNA SNORD86 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene small nucleolar RNA SNORD110 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta Neighboring gene transmembrane channel like 2 Neighboring gene zinc finger protein 343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of box C/D methylation guide snoRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleolar protein 56

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      63840421..63846582 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149408.2 → XP_015004894.1  nucleolar protein 56 isoform X1

      UniProtKB/TrEMBL
      F6R553, G7N2S9, H9ES07
      Related
      ENSMMUP00000018256.3, ENSMMUT00000019496.4
      Conserved Domains (2) summary
      COG1498
      Location:48 → 416
      SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
      pfam08156
      Location:5 → 70
      NOP5NT; NOP5NT (NUC127) domain

    2. XM_015149410.2 → XP_015004896.1  nucleolar protein 56 isoform X2

      Conserved Domains (3) summary
      smart00931
      Location:168 → 219
      NOSIC; NOSIC (NUC001) domain
      COG1498
      Location:48 → 416
      SIK1; RNA processing factor Prp31, contains Nop domain [Translation, ribosomal structure and biogenesis]
      pfam08156
      Location:5 → 70
      NOP5NT; NOP5NT (NUC127) domain
    Nucleotide Protein
    Heading Accession and Version

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