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    SEC24A SEC24 homolog A, COPII coat complex component [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711109, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SEC24Aprovided by VGNC
    Official Full Name
    SEC24 homolog A, COPII coat complex componentprovided by VGNC
    Primary source
    VGNC:VGNC:77152
    See related
    Ensembl:ENSMMUG00000004418
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SEC24A in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (132116980..132195701)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (132368396..132448163)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene secretion associated Ras related GTPase 1B Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114678910 Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA Neighboring gene calcium modulating ligand Neighboring gene DEAD-box helicase 46

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in COPII-coated vesicle cargo loading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPII vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein transport protein Sec24A
    Names
    SEC24 family, member A
    SEC24 related gene family, member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      132116980..132195701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849731.1 → XP_028705564.1  protein transport protein Sec24A isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZA13, H9F532
      Related
      ENSMMUP00000061464.1, ENSMMUT00000087623.1
      Conserved Domains (1) summary
      COG5028
      Location:245 → 1056
      COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

    2. XM_015140943.2 → XP_014996429.1  protein transport protein Sec24A isoform X3

      Conserved Domains (3) summary
      pfam04810
      Location:428 → 464
      zf-Sec23_Sec24; Sec23/Sec24 zinc finger
      pfam15834
      Location:92 → 143
      THEG4; Testis highly expressed protein 4
      cl00057
      Location:501 → 595
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    3. XM_015140944.2 → XP_014996430.1  protein transport protein Sec24A isoform X3

      Conserved Domains (3) summary
      pfam04810
      Location:428 → 464
      zf-Sec23_Sec24; Sec23/Sec24 zinc finger
      pfam15834
      Location:92 → 143
      THEG4; Testis highly expressed protein 4
      cl00057
      Location:501 → 595
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    4. XM_001109620.3 → XP_001109620.1  protein transport protein Sec24A isoform X1

      UniProtKB/TrEMBL
      F7C397, H9F532
      Related
      ENSMMUP00000034119.2, ENSMMUT00000041086.3
      Conserved Domains (7) summary
      COG5028
      Location:245 → 1093
      COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
      cd01479
      Location:501 → 743
      Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
      pfam00626
      Location:964 → 1039
      Gelsolin; Gelsolin repeat
      pfam04810
      Location:428 → 464
      zf-Sec23_Sec24; Sec23/Sec24 zinc finger
      pfam04815
      Location:843 → 938
      Sec23_helical; Sec23/Sec24 helical domain
      pfam08033
      Location:744 → 828
      Sec23_BS; Sec23/Sec24 beta-sandwich domain
      pfam15834
      Location:92 → 143
      THEG4; Testis highly expressed protein 4
    Nucleotide Protein
    Heading Accession and Version

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