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    CD53 CD53 molecule [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702350, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD53provided by VGNC
    Official Full Name
    CD53 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:70771
    See related
    Ensembl:ENSMMUG00000000811
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CD53 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (113246618..113275571, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (111887319..111916478)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene cyclin-T2-like Neighboring gene ligand dependent nuclear receptor interacting factor 1 Neighboring gene uncharacterized LOC114678117 Neighboring gene potassium voltage-gated channel subfamily A member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leukocyte surface antigen CD53

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      113246618..113275571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148031.2 → XP_015003517.2  leukocyte surface antigen CD53

      UniProtKB/TrEMBL
      F6Q2I0, H9ZFP2
      Related
      ENSMMUP00000001103.3, ENSMMUT00000001175.4
      Conserved Domains (2) summary
      cd03164
      Location:104 → 186
      CD53_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
      pfam00335
      Location:9 → 206
      Tetraspannin; Tetraspanin family

    2. XM_028830501.1 → XP_028686334.1  leukocyte surface antigen CD53

      UniProtKB/TrEMBL
      F6Q2I0, H9ZFP2
      Conserved Domains (2) summary
      cd03164
      Location:104 → 186
      CD53_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
      pfam00335
      Location:9 → 206
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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